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13_1_40cm_3_scaffold_565

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_565_1
RBG_16_Archaea_50_20_curated, Archaea

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1..1212
DNA (1212bp) protein (404aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGH1_METVM
translation initiation factor IF-2; K03242 translation initiation factor 2 subunit 3 Tax=RBG_16_Archaea_50_20_curated
translation initiation factor IF-2
13_1_40cm_3_scaffold_565_2
unknown

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1293..1775
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_3_scaffold_565_3
unknown

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1864..2247
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_3_scaffold_565_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2655..4103
DNA (1449bp) protein (483aa)
Archaea-specific RecJ-like exonuclease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5C1_9ARCH
phosphoesterase RecJ domain protein; K07463 archaea-specific RecJ-like exonuclease Tax=RBG_13_Bathyarchaeota_38_9_curated
archaea-specific RecJ-like exonuclease
13_1_40cm_3_scaffold_565_5
RBG_16_Archaea_50_20_curated, Archaea

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4361..5035
DNA (675bp) protein (225aa)
30S ribosomal protein S3Ae n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XTM1_9CREN
30S ribosomal protein S3Ae; K02984 small subunit ribosomal protein S3Ae Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S3Ae
13_1_40cm_3_scaffold_565_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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5047..6378
DNA (1332bp) protein (444aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RBG_16_Bathyarchaeota_48_13_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Probable phosphoglucosamine mutase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXA1_METFV
13_1_40cm_3_scaffold_565_7
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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6384..7619
DNA (1236bp) protein (412aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RBG_16_Bathyarchaeota
Bifunctional protein GlmU n=1 Tax=Methanobacterium sp. MB1 RepID=U6E9U6_9EURY
glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
13_1_40cm_3_scaffold_565_8
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(7653..8708)
DNA (1056bp) protein (352aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-terminal phosphate cyclase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEW5_PYRF1
13_1_40cm_3_scaffold_565_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8777..9349
DNA (573bp) protein (191aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_13_Bathyarchaeota_38_9_curated
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6ECE2_9EURY
hypothetical protein
13_1_40cm_3_scaffold_565_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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9353..9874
DNA (522bp) protein (174aa)
hypothetical protein; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B7Y6_ACIHW
nicotinamide-nucleotide adenylyltransferase
13_1_40cm_3_scaffold_565_11
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9871..10662)
DNA (792bp) protein (264aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRI9_9BACT
hypothetical protein; K09134 hypothetical protein Tax=GWA2_Deltaproteobacteria_55_10_curated
hypothetical protein
13_1_40cm_3_scaffold_565_12

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comp(10991..11368)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MU86_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKA48572.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
transcription regulator
13_1_40cm_3_scaffold_565_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11448..11882
DNA (435bp) protein (145aa)
Tautomerase enzyme n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV46_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:KFE63175.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
4-oxalocrotonate tautomerase family protein
13_1_40cm_3_scaffold_565_14
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(11905..12651)
DNA (747bp) protein (249aa)
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_40cm_3_scaffold_565_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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13227..14396
DNA (1170bp) protein (390aa)
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9P6_NITGG
aminotransferase OR putativesoluble hydrogenase, small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit
13_1_40cm_3_scaffold_565_16
RBG_16_Archaea_50_20_curated, Archaea

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14402..15283
DNA (882bp) protein (294aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7B6_9ARCH
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_565_17
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15361..16119)
DNA (759bp) protein (253aa)
Kanamycin nucleotidyltransferase n=1 Tax=Bacillus cereus F65185 RepID=C2XDG8_BACCE
Kanamycin nucleotidyltransferase {ECO:0000313|EMBL:EEL64435.1}; TaxID=526989 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus
aminoglycoside nucleotidyltransferase
13_1_40cm_3_scaffold_565_18
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(16179..16766)
DNA (588bp) protein (196aa)
hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein LkmesMB_21634 id=2301497 bin=GWB2_Chloroflexi_54_36 species=Leptospira kmetyi genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
13_1_40cm_3_scaffold_565_19
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

16844..18067
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TQZ8_9EURY
nitrogenase subunit NifH (ATPase)-like protein Tax=CG_Caldi_01
hypothetical protein
13_1_40cm_3_scaffold_565_20
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18072..18449)
DNA (378bp) protein (126aa)
extradiol dioxygenase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373F8DD
putative lyase
Putative lyase {ECO:0000313|EMBL:ABE33353.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (st
13_1_40cm_3_scaffold_565_21
unknown

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18747..20633
DNA (1887bp) protein (629aa)

This feature has no annotations

13_1_40cm_3_scaffold_565_22
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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20841..21500
DNA (660bp) protein (220aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=24419252 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
dienelactone hydrolase
13_1_40cm_3_scaffold_565_23

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21566..22213
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:AKA49137.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_3_scaffold_565_24
unknown

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comp(22425..23165)
DNA (741bp) protein (247aa)

This feature has no annotations

13_1_40cm_3_scaffold_565_25
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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comp(23168..24256)
DNA (1089bp) protein (363aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7B1_9CHLR
alcohol dehydrogenase Tax=RBG_16_Zixibacteria_50_21_curated
NADPH:quinone reductase and related Zn-dependent oxidoreductase
13_1_40cm_3_scaffold_565_26
unknown

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comp(24249..25508)
DNA (1260bp) protein (420aa)

This feature has no annotations

13_1_40cm_3_scaffold_565_27
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(25501..26064)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036E2B83
Transcription regulator, ArsR family
Transcription regulator, ArsR family {ECO:0000313|EMBL:ACS33863.1}; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gam
13_1_40cm_3_scaffold_565_28
unknown

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comp(26584..27582)
DNA (999bp) protein (333aa)

This feature has no annotations

13_1_40cm_3_scaffold_565_29
unknown

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comp(27789..28736)
DNA (948bp) protein (316aa)

This feature has no annotations

13_1_40cm_3_scaffold_565_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(28926..30446)
DNA (1521bp) protein (507aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_13_Bathyarchaeota_38_9_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZN53_THELI rbh
Displaying items 1-30 of 37 in total

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