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13_1_40cm_3_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 73 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_57_1
unknown

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comp(3..1544)
DNA (1542bp) protein (514aa)

This feature has no annotations

13_1_40cm_3_scaffold_57_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(1552..4248)
DNA (2697bp) protein (899aa)
Extracellular solute-binding protein family 5 n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EH58_AMICL
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
family 5 extracellular solute-binding protein
13_1_40cm_3_scaffold_57_3
unknown

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4633..4938
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_3_scaffold_57_4
RBG_16_Archaea_50_20_curated, Archaea

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5016..6176
DNA (1161bp) protein (387aa)
Putative aminotransferase n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QTR3_VULM7
aminotransferase Tax=RBG_16_Archaea_50_20_curated
aminotransferase
13_1_40cm_3_scaffold_57_5
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

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6180..6776
DNA (597bp) protein (199aa)
guaA-2; GMP synthase subunit A (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_13_WOR_3_43_14_curated
GMP synthase subunit A (EC:6.3.5.2)
Glutamine amidotransferase class-I n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0B1_9FIRM
13_1_40cm_3_scaffold_57_6

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comp(6791..7672)
DNA (882bp) protein (294aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
ctaB2; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4P5_9ARCH
13_1_40cm_3_scaffold_57_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7823..8503
DNA (681bp) protein (227aa)
Rhomboid family protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) PF8_METH6">RepID=G7WPF8_METH6
rhomboid family protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_40cm_3_scaffold_57_8

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comp(8477..9028)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003655A1B
Marine sediment metagenome DNA, contig: S06H3_L07525 {ECO:0000313|EMBL:GAI13412.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_3_scaffold_57_9
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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9131..9901
DNA (771bp) protein (257aa)
Macrolide export ATP-binding/permease protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIV4_THEBM
ABC transporter
ABC transporter {ECO:0000313|EMBL:AIF68441.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
13_1_40cm_3_scaffold_57_10
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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9922..12477
DNA (2556bp) protein (852aa)
Hypothetical membrane protein id=2108305 bin=GWE2_Firmicute_51_13 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
13_1_40cm_3_scaffold_57_11
unknown

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12617..13114
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_3_scaffold_57_12

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13189..13785
DNA (597bp) protein (199aa)
purH; bifunctional purine biosynthesis protein (EC:2.1.2.3 3.5.4.10)
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YHF6_9ZZZZ
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase {ECO:0000313|EMBL:EQD31282.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ec
13_1_40cm_3_scaffold_57_13
RLO_RIF05_58_11, RIF5, Bacteria

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13782..14867
DNA (1086bp) protein (362aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] T
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000366C3E3
13_1_40cm_3_scaffold_57_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15043..15411
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJM8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59413.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_57_15
unknown

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comp(16366..16530)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_3_scaffold_57_16
unknown

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comp(16543..16644)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_3_scaffold_57_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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16789..17559
DNA (771bp) protein (257aa)
Marine sediment metagenome DNA, contig: S06H3_C02025 Tax=RBG_16_Chloroflexi_68_14_curated
13_1_40cm_3_scaffold_57_18
unknown

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17574..17999
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_3_scaffold_57_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(18022..19071)
DNA (1050bp) protein (350aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) Tax=RBG_16_Thaumarchaeota_49_8_curated
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVM9_9ARCH
13_1_40cm_3_scaffold_57_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(19074..19940)
DNA (867bp) protein (289aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6) Tax=RBG_16_Thaumarchaeota_49_8_curated
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003826EBE
13_1_40cm_3_scaffold_57_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(19941..20375)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000364C5DE
phosphoribosylaminoimidazole carboxylase catalytic subunit Tax=RBG_16_Euryarchaeota_68_12_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_40cm_3_scaffold_57_22
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(20372..20968)
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobactero
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVK5_ACEAZ
5-formyltetrahydrofolate cyclo-ligase
13_1_40cm_3_scaffold_57_23
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(20965..21825)
DNA (861bp) protein (287aa)
Bifunctional protein FolD n=1 Tax=Acetonema longum DSM 6540 RepID=F7NGT8_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 654
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
13_1_40cm_3_scaffold_57_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21822..22445)
DNA (624bp) protein (208aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:AFU57385.1}; EC=2.1.2.2 {ECO:0000313|EMBL:AFU57385.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales
Phosphoribosylglycinamide formyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM7_NITGG
13_1_40cm_3_scaffold_57_25

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comp(22450..23928)
DNA (1479bp) protein (493aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine/glycine ligase n=1 Tax=uncultured archaeon W5-61a RepID=H9BX98_9ARCH
Phosphoribosylamine/glycine ligase {ECO:0000313|EMBL:AFD03420.1}; TaxID=1131008 species="Archaea; environmental samples.;" source="uncultured archaeon W5-61a.;"
13_1_40cm_3_scaffold_57_26

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comp(23925..25226)
DNA (1302bp) protein (434aa)
purF-2; glutamine phosphoribosylpyrophosphate amidotransferase (EC:2.4.2.14)
Glutamine phosphoribosylpyrophosphate amidotransferase n=1 Tax=uncultured archaeon W5-61a RepID=H9BX97_9ARCH
Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000313|EMBL:AFD03419.1}; TaxID=1131008 species="Archaea; environmental samples.;" source="uncultured archaeon W5-61a.;"
13_1_40cm_3_scaffold_57_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(25234..26664)
DNA (1431bp) protein (477aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
class II glutamine amidotransferase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_57_28
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(26661..28877)
DNA (2217bp) protein (739aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
13_1_40cm_3_scaffold_57_29
unknown

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comp(28907..29110)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_57_30
unknown

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comp(29114..29320)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 73 in total

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