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13_1_40cm_3_scaffold_6594

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6594_1
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..578)
DNA (576bp) protein (192aa)
ATP-dependent helicase n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036E17B7
ATP-dependent helicase {ECO:0000313|EMBL:EXX90672.1}; TaxID=1380763 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
hypothetical protein
13_1_40cm_3_scaffold_6594_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

724..1164
DNA (441bp) protein (147aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L3P0_METC4
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89969.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_6594_3
unknown

Not on your lists

1194..1712
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_3_scaffold_6594_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1936..3435)
DNA (1500bp) protein (500aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Putative tRNA synthetases class I (C) catalytic domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCG2_9ZZZZ
13_1_40cm_3_scaffold_6594_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3451..4359
DNA (909bp) protein (303aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin biosynthesis protein
13_1_40cm_3_scaffold_6594_6
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

4356..4574
DNA (219bp) protein (73aa)
Putative uncharacterized protein id=2101181 bin=GWB2_Nitrospirae_rel_47_37 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Putative uncharacterized protein Tax=GWB2_Nitrospirae_47_37_curated
13_1_40cm_3_scaffold_6594_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4648..5988
DNA (1341bp) protein (447aa)
Putative uncharacterized protein id=3297528 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_3_scaffold_6594_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(5985..6245)
DNA (261bp) protein (87aa)
FmdB family regulatory protein id=7201842 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
FmdB family regulatory protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
13_1_40cm_3_scaffold_6594_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

6328..7170
DNA (843bp) protein (281aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Archaea_50_20_curated
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE1_SPHTD
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_3_scaffold_6594_10
unknown

Not on your lists

comp(7163..7888)
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_40cm_3_scaffold_6594_11
unknown

Not on your lists

comp(7876..8283)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_3_scaffold_6594_12
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

8985..9395
DNA (411bp) protein (137aa)
Amidohydrolase family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY44_THERP
amidohydrolase family protein
Amidohydrolase family {ECO:0000313|EMBL:ACM04956.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC
13_1_40cm_3_scaffold_6594_13
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9392..9913)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGH0_NEPCE
Uncharacterized protein {ECO:0000313|EMBL:EAR59539.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
hypothetical protein
13_1_40cm_3_scaffold_6594_14
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

9977..10483
DNA (507bp) protein (169aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=2 Tax=Salinibacter ruber RepID=D5HCR4_SALRM
PHA accumulation regulator DNA-binding protein Tax=RBG_16_Chloroflexi_57_11_curated
regulator for granule-associated proteins
13_1_40cm_3_scaffold_6594_15
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10621..11292)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00036B517D
Uncharacterized protein {ECO:0000313|EMBL:CDO05373.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein
13_1_40cm_3_scaffold_6594_16
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11300..12022)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IH66_ALIAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ43151.1}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldariu
13_1_40cm_3_scaffold_6594_17
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12185..13441
DNA (1257bp) protein (419aa)
Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKS4_ROSCS
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus c
13_1_40cm_3_scaffold_6594_18
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13500..14522
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00035FC79B
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADP84301.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_40cm_3_scaffold_6594_19
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14522..15532
DNA (1011bp) protein (337aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FA51_DESAA
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AJT66138.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus
13_1_40cm_3_scaffold_6594_20
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15557..16021)
DNA (465bp) protein (155aa)
ferredoxin Tax=RBG_16_Actinobacteria_68_21_curated
13_1_40cm_3_scaffold_6594_21
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

16263..17267
DNA (1005bp) protein (335aa)
guaB; IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=CG_CP01_01
IMP dehydrogenase family protein id=3175544 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
inosine 5-monophosphate dehydrogenase
13_1_40cm_3_scaffold_6594_22
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

17320..18861
DNA (1542bp) protein (514aa)
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_13_Chloroflexi_57_8_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K041_DEHLB rbh
GMP synthase
13_1_40cm_3_scaffold_6594_23
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19076..19762
DNA (687bp) protein (229aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB48_AMMDK
Displaying 23 items

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