name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_3_scaffold_835_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(3..713)
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Dipeptide transport system permease DppB id=4526369 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
dppB; dipeptide transport system permease DppB
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13_1_40cm_3_scaffold_835_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(710..2083)
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RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=GWA2_Rokubacteria_73_35_curated
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] id=14627050 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RNA methyltransferase
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13_1_40cm_3_scaffold_835_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
2168..4339
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide repeat family protein id=4526378 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_1_40cm_3_scaffold_835_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
4356..5081
|
Uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=4526381 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_1_40cm_3_scaffold_835_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
5148..6005
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ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase id=3716360 bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
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13_1_40cm_3_scaffold_835_trna_1
unknown
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Not on your lists |
6107..6179
|
transferRNA
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13_1_40cm_3_scaffold_835_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
6205..7149
|
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=4526388 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_835_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
7172..7843
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50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 id=14627044 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
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13_1_40cm_3_scaffold_835_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
7895..8407
|
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=GWA2_Rokubacteria_73_35_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=4785576 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_835_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(8414..9661)
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hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Transporter, UIT6 family id=4785574 bin=GWA2_Methylomirabilis_73_35 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
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13_1_40cm_3_scaffold_835_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
9766..9960
|
30S ribosomal protein S21 id=4785572 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsU; 30S ribosomal protein S21 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rpsU; 30S ribosomal protein S21
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13_1_40cm_3_scaffold_835_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
10026..12425
|
MutS2 family protein; K07456 DNA mismatch repair protein MutS2 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
MutS2 protein id=3357842 bin=GWC2_Methylomirabilis_70_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
mismatch repair ATPase
|
|
13_1_40cm_3_scaffold_835_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
12425..14290
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DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA primase id=4785564 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA primase
|
|
13_1_40cm_3_scaffold_835_13
unknown
|
Not on your lists |
14287..14400
|
This feature has no annotations |
|
13_1_40cm_3_scaffold_835_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
14405..15883
|
rpoD; RNA polymerase sigma factor RpoD (Sigma-70); K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor RpoD id=3357851 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RpoD subfamily RNA polymerase sigma-70 subunit
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13_1_40cm_3_scaffold_835_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
15823..16071
|
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=GWC2_Rokubacteria_70_16_curated
rpoD; RNA polymerase sigma factor rpod; K03086 RNA polymerase primary sigma factor id=14627038 bin=bin7_NC10_sister species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RpoD family RNA polymerase sigma factor
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13_1_40cm_3_scaffold_835_trna_2
unknown
|
Not on your lists |
16111..16182
|
transferRNA
|
|
13_1_40cm_3_scaffold_835_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria
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Not on your lists |
16394..17107
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627037 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
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13_1_40cm_3_scaffold_835_17
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17242..17574
|
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5L6_DESAP
ribonuclease H
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13_1_40cm_3_scaffold_835_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
17689..18750
|
Uncharacterized protein id=4217956 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
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13_1_40cm_3_scaffold_835_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
19300..21360
|
GAF sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Multi-sensor hybrid histidine kinase id=4736662 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GAF sensor hybrid histidine kinase
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13_1_40cm_3_scaffold_835_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
21462..22481
|
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
mreB; Rod shape-determining protein mreB id=14626892 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rod shape-determining protein MreB
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13_1_40cm_3_scaffold_835_21
unknown
|
Not on your lists |
22534..22821
|
This feature has no annotations |
|
13_1_40cm_3_scaffold_835_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(23801..25381)
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h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
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13_1_40cm_3_scaffold_835_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(25590..26735)
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hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003750DFF
Uncharacterized protein {ECO:0000313|EMBL:ETW98117.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase
|
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13_1_40cm_3_scaffold_835_24
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26732..27961)
|
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS94_RUBXD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABG05734.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacte
|
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13_1_40cm_3_scaffold_835_25
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27961..28269)
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Rieske (2Fe-2S) region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS95_RUBXD
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) region {ECO:0000313|EMBL:ABG05733.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
|
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13_1_40cm_3_scaffold_835_26
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(28405..29097)
|
lipase (EC:3.1.1.3) Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1CRS3_EMIHU
esterase/lipase
|