ggKbase home page

13_1_40cm_3_scaffold_9053

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_9053_1
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..483)
DNA (483bp) protein (161aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Thiolase {ECO:0000313|EMBL:AAZ54474.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AAZ54474.1};; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermo
Thiolase n=2 Tax=Thermobifida fusca RepID=Q47SU3_THEFY
13_1_40cm_3_scaffold_9053_2
unknown

Not on your lists

1099..1632
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_40cm_3_scaffold_9053_3
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1554..2531)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003766E4A
Anti-sigma-factor antagonist {ECO:0000313|EMBL:EMF00596.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC
13_1_40cm_3_scaffold_9053_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2724..2942)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003662539
Uncharacterized protein {ECO:0000313|EMBL:CEL20510.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
ferredoxin
13_1_40cm_3_scaffold_9053_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2942..4117)
DNA (1176bp) protein (392aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5) Tax=RBG_16_RIF_CHLX_72_14_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1S2_SPHTD
13_1_40cm_3_scaffold_9053_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4108..4641)
DNA (534bp) protein (178aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FW72_AMYMS
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_40cm_3_scaffold_9053_7
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4638..5603)
DNA (966bp) protein (322aa)
ApbE family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FDV2_9ACTO
Thiamine biosynthesis protein {ECO:0000313|EMBL:KFF99204.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
ApbE family lipoprotein
13_1_40cm_3_scaffold_9053_8
unknown

Not on your lists

comp(5603..5893)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_3_scaffold_9053_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5980..6471)
DNA (492bp) protein (164aa)
Two-component system sensor kinase id=4880688 bin=GWC2_Chloroflexi_73_18 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
histidine kinase Tax=GWC2_RIF_CHLX_73_18_curated
kinB4; sensory box histidine kinase
13_1_40cm_3_scaffold_9053_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6471..7229)
DNA (759bp) protein (253aa)
Two-component system sensor kinase id=4880688 bin=GWC2_Chloroflexi_73_18 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
histidine kinase Tax=GWC2_RIF_CHLX_73_18_curated
ATP-binding protein
13_1_40cm_3_scaffold_9053_11
unknown

Not on your lists

comp(7345..7599)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_9053_12
unknown

Not on your lists

7711..7851
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_3_scaffold_9053_13
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7851..8129
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5Z0V4_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD55937.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
13_1_40cm_3_scaffold_9053_14
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8165..9478
DNA (1314bp) protein (438aa)
citrate synthase I (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae;
Citrate synthase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B3I8_FRADG rbh
13_1_40cm_3_scaffold_9053_15
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9447..10394)
DNA (948bp) protein (316aa)
von Willebrand factor type A n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S7M8_MICSL
von willebrand factor type a
von Willebrand factor type A {ECO:0000313|EMBL:ADL44881.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (
13_1_40cm_3_scaffold_9053_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(10391..11350)
DNA (960bp) protein (320aa)
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein id=14631418 bin=bin9_gal15 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_3_scaffold_9053_17
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..12348)
DNA (876bp) protein (292aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
MoxR-like ATPase n=1 Tax=Thermus oshimai JL-2 RepID=K7RI83_THEOS
MoxR-like ATPase
13_1_40cm_3_scaffold_9053_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12558..12797
DNA (240bp) protein (80aa)
Bll5130 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89JY9_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ70691.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
13_1_40cm_3_scaffold_9053_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12857..14932
DNA (2076bp) protein (692aa)
multidrug ABC transporter permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026285DE rbh
multidrug ABC transporter ATPase/permease
Multidrug ABC transporter ATPase/permease {ECO:0000313|EMBL:AHH97062.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida D
13_1_40cm_3_scaffold_9053_20
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14962..15327
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7W2_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS24808.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_9053_21
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15278..15820
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJZ2_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC81973.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_9053_22
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16111..16806
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036E4815
Uncharacterized protein {ECO:0000313|EMBL:KJS55899.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp.
hypothetical protein
13_1_40cm_3_scaffold_9053_23
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

16848..17831
DNA (984bp) protein (328aa)
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family id=14628163 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=CSP1_4_Chloroflexi
Kef-type K+ transport system, predicted NAD-binding component
13_1_40cm_3_scaffold_9053_24
unknown

Not on your lists

17798..17935
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_3_scaffold_9053_25
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17944..18231)
DNA (288bp) protein (96aa)
30S ribosomal protein S4 n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=RS4_NATTJ
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermo
Displaying 25 items

View Taxonomy