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13_1_40cm_3_scaffold_9898

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_9898_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2..1462
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I299_DESAP
Adenine-specific DNA methylase containing a Zn-ribbon Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_3_scaffold_9898_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1486..4194
DNA (2709bp) protein (903aa)
ATPase (AAA+ superfamily)-like protein id=4036628 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ATPase AAA Tax=CG_Rhodocyc_01
ATPase AAA
13_1_40cm_3_scaffold_9898_3
unknown

Not on your lists

comp(4634..4837)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_9898_4
unknown

Not on your lists

5285..5989
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_40cm_3_scaffold_9898_5
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6032..6451)
DNA (420bp) protein (140aa)
Conjugal transfer protein trbG {ECO:0000313|EMBL:CCE25745.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methy
13_1_40cm_3_scaffold_9898_6
unknown

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6554..7399
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_40cm_3_scaffold_9898_7
unknown

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7404..7670
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_3_scaffold_9898_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7639..8754)
DNA (1116bp) protein (372aa)
Prophage dlp12 integrase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EPH0_9GAMM
Prophage dlp12 integrase {ECO:0000313|EMBL:EHL31005.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii
integrase
13_1_40cm_3_scaffold_9898_trna_2
unknown

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comp(8896..8968)
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_9898_trna_1
unknown

Not on your lists

comp(9013..9083)
DNA (71bp)
transferRNA
13_1_40cm_3_scaffold_9898_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9131..9403)
DNA (273bp) protein (91aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histone family protein DNA-binding protein id=4493677 bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histone family protein DNA-binding protein
13_1_40cm_3_scaffold_9898_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9485..12538)
DNA (3054bp) protein (1018aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor signal transduction histidine kinase id=3564564 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_9898_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12577..13089
DNA (513bp) protein (171aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4493681 bin=GWC2_Methylomirabilis_70_16 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_9898_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13086..14102
DNA (1017bp) protein (339aa)
ubiD1; 3-octaprenyl-4-hydroxybenzoate carboxylyase UbiD (EC:4.1.1.-) Tax=GWA2_Rokubacteria_73_35_curated
3-octaprenyl-4-hydroxybenzoate carboxylyase UbiD id=3564567 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
menaquinone biosynthesis decarboxylase
13_1_40cm_3_scaffold_9898_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14078..14509
DNA (432bp) protein (144aa)
ubiD1; 3-octaprenyl-4-hydroxybenzoate carboxylyase UbiD (EC:4.1.1.-) Tax=GWA2_Rokubacteria_73_35_curated
3-octaprenyl-4-hydroxybenzoate carboxylyase UbiD id=3564567 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
13_1_40cm_3_scaffold_9898_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14524..15351
DNA (828bp) protein (276aa)
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39)
4-hydroxybenzoate polyprenyltransferase id=4493686 bin=GWC2_Methylomirabilis_70_16 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_3_scaffold_9898_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15402..16067
DNA (666bp) protein (222aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Demethylmenaquinone methyltransferase id=3564574 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ubiquinone/menaquinone biosynthesis methyltransferase
13_1_40cm_3_scaffold_9898_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16181..17326
DNA (1146bp) protein (382aa)
homoserine O-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homoserine O-acetyltransferase id=3564579 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
homoserine O-acetyltransferase
13_1_40cm_3_scaffold_9898_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17393..17701
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_3_scaffold_9898_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

17738..17860
DNA (123bp) protein (41aa)
dehydrogenase (EC:1.6.99.5)
Putative dehydrogenase, similar to gamma (5') and beta (3') subunits of formate dehydrogenase and to nuoE and nuoF of NADH dehydrogenase (FdhB2/C2) {ECO:0000313|EMBL:CBE67915.1}; EC=1.6.99.5 {ECO:0000
Putative dehydrogenase, similar to gamma (5') and beta (3') subunits of formate dehydrogenase and to nuoE and nuoF of NADH dehydrogenase (FdhB2/C2) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM29_9BACT
Displaying 20 items

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