ggKbase home page

13_1_40cm_3_scaffold_100

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_100_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..354
DNA (354bp) protein (118aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARP9_DELSC
Crp/Fnr family transcriptional regulator
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KFJ09373.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
13_1_40cm_3_scaffold_100_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

576..887
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BV06_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34468.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_100_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1077..2246
DNA (1170bp) protein (390aa)
para-aminobenzoate synthase subunit I (EC:2.6.1.85)
Para-aminobenzoate synthase, subunit I n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARP7_DELSC rbh
Aminodeoxychorismate synthase, component I {ECO:0000313|EMBL:EZP49489.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delft
13_1_40cm_3_scaffold_100_4
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2261..2896
DNA (636bp) protein (212aa)
Aminotransferase class IV n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARP6_DELSC rbh
class IV aminotransferase
Aminotransferase class IV {ECO:0000313|EMBL:AEF91784.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1
13_1_40cm_3_scaffold_100_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3029..4012
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV07_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX34469.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_100_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4061..4699)
DNA (639bp) protein (213aa)
DTW domain containing protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV08_DELAS rbh
DTW domain-containing protein rbh
DTW domain containing protein {ECO:0000313|EMBL:ABX34470.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
13_1_40cm_3_scaffold_100_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4715..5074)
DNA (360bp) protein (120aa)
5-carboxymethyl-2-hydroxymuconate isomerase n=4 Tax=Delftia RepID=A9BV09_DELAS
5-carboxymethyl-2-hydroxymuconate isomerase
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:EPD36935.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delft
13_1_40cm_3_scaffold_100_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5106..6323)
DNA (1218bp) protein (406aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase {ECO:0000255|HAMAP-Rule:MF_01693}; Short=AONS {ECO:0000255|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000255|HAMAP-Rule:MF_01693};; 7-keto-8-amino-pelargonic acid synthas
8-amino-7-oxononanoate synthase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=BIOF_DELAS rbh
13_1_40cm_3_scaffold_100_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6320..7021)
DNA (702bp) protein (234aa)
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV11_DELAS rbh
13_1_40cm_3_scaffold_100_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7018..8340)
DNA (1323bp) protein (441aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV12_DELAS rbh
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:ABX34474.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;
13_1_40cm_3_scaffold_100_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8368..8748)
DNA (381bp) protein (127aa)
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=2 Tax=Delftia RepID=PAND_DELAS
13_1_40cm_3_scaffold_100_12
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8890..9255)
DNA (366bp) protein (122aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV14_DELAS
hypothetical protein
13_1_40cm_3_scaffold_100_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9264..9902)
DNA (639bp) protein (213aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV15_DELAS rbh
hypothetical protein
13_1_40cm_3_scaffold_100_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9962..10828)
DNA (867bp) protein (289aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV16_DELAS rbh
chromosome segregation and condensation protein ScpA
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
13_1_40cm_3_scaffold_100_15
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10904..11107)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BV17_DELAS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91773.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (str
13_1_40cm_3_scaffold_100_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11154..11651
DNA (498bp) protein (166aa)
Putative lipoprotein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV18_DELAS rbh
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABX34480.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain
13_1_40cm_3_scaffold_100_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11832..12476
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV19_DELAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34481.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_100_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12479..12775)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV20_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34482.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_100_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12911..14977)
DNA (2067bp) protein (689aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV21_DELAS rbh
metG; methionyl-tRNA synthetase
13_1_40cm_3_scaffold_100_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..16355)
DNA (1239bp) protein (413aa)
Patatin n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV22_DELAS rbh
patatin
Patatin {ECO:0000313|EMBL:ABX34484.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / S
13_1_40cm_3_scaffold_100_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16412..16972)
DNA (561bp) protein (187aa)
Restriction endonuclease n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV23_DELAS rbh
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:ABX34485.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (str
13_1_40cm_3_scaffold_100_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17111..18202
DNA (1092bp) protein (364aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9BV24_DELAS rbh
ParA/MinD ATPase-like protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34486.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_100_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18222..19190
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV25_DELAS rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX34487.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
13_1_40cm_3_scaffold_100_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19187..21529)
DNA (2343bp) protein (781aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV26_DELAS rbh
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ABX34488.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; De
13_1_40cm_3_scaffold_100_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21637..22332)
DNA (696bp) protein (232aa)
Isochorismatase hydrolase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV27_DELAS rbh
isochorismatase hydrolase rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ABX34489.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (st
13_1_40cm_3_scaffold_100_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22329..23414)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BV28_DELAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34490.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_100_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23465..24316)
DNA (852bp) protein (284aa)
Alpha/beta hydrolase fold n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV29_DELAS rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABX34491.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (st
13_1_40cm_3_scaffold_100_28
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24328..25116)
DNA (789bp) protein (263aa)
Maleate isomerase {ECO:0000256|HAMAP-Rule:MF_00943}; EC=5.2.1.1 {ECO:0000256|HAMAP-Rule:MF_00943};; Maleate cis-trans isomerase {ECO:0000256|HAMAP-Rule:MF_00943}; TaxID=742013 species="Bacteria; Prote
Maleate isomerase n=3 Tax=Delftia RepID=A9BV30_DELAS rbh
Asp/Glu/hydantoin racemase
13_1_40cm_3_scaffold_100_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25440..26597
DNA (1158bp) protein (386aa)
Monooxygenase FAD-binding n=2 Tax=Delftia RepID=A9BV31_DELAS rbh
monooxygenase FAD-binding
Monooxygenase FAD-binding {ECO:0000313|EMBL:ABX34493.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (st
Displaying 29 items

View Taxonomy