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13_1_40cm_3_scaffold_112

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_112_1
unknown

Not on your lists

comp(1..792)
DNA (792bp) protein (264aa)

This feature has no annotations

13_1_40cm_3_scaffold_112_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1342..1857
DNA (516bp) protein (172aa)
Peptidase M20 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K4_DELAS
peptidase M20
Peptidase M20/M25/M40 family protein {ECO:0000313|EMBL:KFJ13947.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
13_1_40cm_3_scaffold_112_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1857..2741
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K3_DELAS rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABX38666.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (st
13_1_40cm_3_scaffold_112_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2728..3480)
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K2_DELAS rbh
16S ribosomal RNA methyltransferase RsmE
13_1_40cm_3_scaffold_112_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3494..4591)
DNA (1098bp) protein (366aa)
Aminoglycoside phosphotransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K1_DELAS rbh
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABX38664.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovo
13_1_40cm_3_scaffold_112_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4795..7119
DNA (2325bp) protein (775aa)
LPS-assembly protein LptD n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K0_DELAS rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
organic solvent tolerance protein rbh
13_1_40cm_3_scaffold_112_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7161..8588
DNA (1428bp) protein (476aa)
Chaperone SurA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J9_DELAS rbh
SurA domain-containing protein
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
13_1_40cm_3_scaffold_112_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8641..9432
DNA (792bp) protein (264aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J8_DELAS rbh
ksgA; dimethyladenosine transferase
13_1_40cm_3_scaffold_112_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9513..9938)
DNA (426bp) protein (142aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9C1J7_DELAS
barnase inhibitor
Uncharacterized protein {ECO:0000313|EMBL:EPD40196.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
13_1_40cm_3_scaffold_112_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10088..10507)
DNA (420bp) protein (140aa)
Guanine-specific ribonuclease N1 and T1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J6_DELAS
guanine-specific ribonuclease N1 and T1
Guanine-specific ribonuclease N1 and T1 {ECO:0000313|EMBL:ABX38659.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
13_1_40cm_3_scaffold_112_11
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10825..13134)
DNA (2310bp) protein (770aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase n=2 Tax=Delftia RepID=A9C1J5_DELAS rbh
malic protein NAD-binding protein rbh
Malic protein NAD-binding protein {ECO:0000313|EMBL:AEF92876.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (st
13_1_40cm_3_scaffold_112_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13343..14809)
DNA (1467bp) protein (489aa)
MlrC domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J4_DELAS rbh
MlrC domain-containing protein rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delf
13_1_40cm_3_scaffold_112_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14806..16101)
DNA (1296bp) protein (432aa)
amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ABX38656.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ABX38656.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
Amidase, hydantoinase/carbamoylase family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J3_DELAS rbh
13_1_40cm_3_scaffold_112_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16134..16844)
DNA (711bp) protein (237aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J2_DELAS rbh
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABX38655.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_112_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16841..17620)
DNA (780bp) protein (260aa)
ABC transporter related n=3 Tax=Delftia RepID=A9C1J1_DELAS rbh
ABC transporter-like protein rbh
ABC transporter family protein {ECO:0000313|EMBL:KFJ13894.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
13_1_40cm_3_scaffold_112_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17617..18609)
DNA (993bp) protein (331aa)
Inner-membrane translocator n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1J0_DELAS rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABX38653.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (
13_1_40cm_3_scaffold_112_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18615..19475)
DNA (861bp) protein (287aa)
Inner-membrane translocator n=3 Tax=Delftia RepID=A9C1I9_DELAS rbh
ABC transporter permease rbh
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EZP56864.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sour
13_1_40cm_3_scaffold_112_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19672..20877)
DNA (1206bp) protein (402aa)
ABC branched chain amino acid family transporter, periplasmic ligand binding protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I8_DELAS rbh
branched chain amino acid ABC transporter periplasmic ligand-binding protein rbh
ABC branched chain amino acid family transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:ABX38651.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
13_1_40cm_3_scaffold_112_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21122..22138
DNA (1017bp) protein (339aa)
GntR domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I7_DELAS rbh
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ABX38650.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain D
13_1_40cm_3_scaffold_112_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22251..23267
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I6_DELAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP56867.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
13_1_40cm_3_scaffold_112_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..24705)
DNA (1359bp) protein (453aa)
beta alanine--pyruvate transaminase (EC:2.6.1.18) rbh
Beta-alanine--pyruvate transaminase {ECO:0000313|EMBL:ABX38648.1}; EC=2.6.1.18 {ECO:0000313|EMBL:ABX38648.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
Beta-alanine--pyruvate transaminase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I5_DELAS rbh
13_1_40cm_3_scaffold_112_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24951..25919
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I4_DELAS rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX38647.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
13_1_40cm_3_scaffold_112_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26217..26321)
DNA (105bp) protein (35aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP56870.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
13_1_40cm_3_scaffold_112_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26341..26598)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I3_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38646.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_112_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26749..27150
DNA (402bp) protein (134aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABX38645.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABX38645.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1I2_DELAS
Displaying 25 items

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