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13_1_40cm_3_scaffold_65

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_65_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..769
DNA (768bp) protein (256aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=3 Tax=cellular organisms RepID=S2WUP1_DELAC
13_1_40cm_3_scaffold_65_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

927..2129
DNA (1203bp) protein (401aa)
Ribosomal RNA methyltransferase RrmJ/FtsJ n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C183_DELAS rbh
ribosomal RNA methyltransferase RrmJ/FtsJ rbh
Ribosomal RNA methyltransferase RrmJ/FtsJ {ECO:0000313|EMBL:ABX38546.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
13_1_40cm_3_scaffold_65_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2152..2979
DNA (828bp) protein (276aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Methylenetetrahydrofolate reductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C182_DELAS rbh
13_1_40cm_3_scaffold_65_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3058..3969
DNA (912bp) protein (304aa)
Rare lipoprotein A n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C181_DELAS rbh
rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ABX38544.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DS
13_1_40cm_3_scaffold_65_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3977..4849)
DNA (873bp) protein (291aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
Ribosomal RNA large subunit methyltransferase J n=2 Tax=Delftia RepID=A9C180_DELAS rbh
hypothetical protein
13_1_40cm_3_scaffold_65_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5098..5526
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=4 Tax=Delftia RepID=RL13_DELAS
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
13_1_40cm_3_scaffold_65_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5537..5929
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=4 Tax=Delftia RepID=RS9_DELAS
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;
13_1_40cm_3_scaffold_65_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6144..6518
DNA (375bp) protein (125aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=ERPA_DELAS
iron-sulfur cluster insertion protein ErpA
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000255|HAMAP-Rule:MF_01380}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" s
13_1_40cm_3_scaffold_65_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6635..8077
DNA (1443bp) protein (481aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C176_DELAS rbh
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABX38539.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="
13_1_40cm_3_scaffold_65_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8357..9970
DNA (1614bp) protein (538aa)
Xanthine dehydrogenase, small subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C175_DELAS rbh
Xanthine dehydrogenase, small subunit {ECO:0000313|EMBL:ABX38538.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
xanthine dehydrogenase small subunit rbh
13_1_40cm_3_scaffold_65_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9972..12398
DNA (2427bp) protein (809aa)
Xanthine dehydrogenase, molybdopterin binding subunit {ECO:0000313|EMBL:ABX38537.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABX38537.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
xanthine dehydrogenase, molybdopterin-binding subunit (EC:1.17.1.4)
Xanthine dehydrogenase, molybdopterin binding subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C174_DELAS rbh
13_1_40cm_3_scaffold_65_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12575..13873
DNA (1299bp) protein (433aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C173_DELAS rbh
xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ABX38536.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidov
13_1_40cm_3_scaffold_65_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13961..15109)
DNA (1149bp) protein (383aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C172_DELAS rbh
anmK; anhydro-N-acetylmuramic acid kinase rbh
13_1_40cm_3_scaffold_65_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15215..16582)
DNA (1368bp) protein (456aa)
Peptidase M23B n=2 Tax=Delftia RepID=A9C171_DELAS rbh
peptidase M23 rbh
Peptidase M23B {ECO:0000313|EMBL:ABX38534.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14
13_1_40cm_3_scaffold_65_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16777..18009
DNA (1233bp) protein (411aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=2 Tax=Delftia RepID=A9C170_DELAS rbh
tyrosyl-tRNA synthetase rbh
13_1_40cm_3_scaffold_65_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18136..19110)
DNA (975bp) protein (325aa)
Transcriptional regulator, LysR family n=3 Tax=Delftia acidovorans RepID=A9C169_DELAS rbh
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD38305.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
13_1_40cm_3_scaffold_65_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19242..20645
DNA (1404bp) protein (468aa)
Bifunctional protein GlmU n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C168_DELAS rbh
UDP-N-acetylglucosamine pyrophosphorylase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
13_1_40cm_3_scaffold_65_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20740..21600
DNA (861bp) protein (287aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Del
Histidine kinase n=2 Tax=Delftia RepID=A9C167_DELAS rbh
histidine kinase
13_1_40cm_3_scaffold_65_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21626..22732)
DNA (1107bp) protein (369aa)
Diguanylate cyclase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C166_DELAS rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABX38529.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain D
13_1_40cm_3_scaffold_65_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23004..23519)
DNA (516bp) protein (172aa)
Transcriptional regulator, AsnC family n=2 Tax=Delftia RepID=A9C165_DELAS rbh
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EZP48139.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia s
13_1_40cm_3_scaffold_65_21
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23570..23890)
DNA (321bp) protein (107aa)
hypothetical protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
13_1_40cm_3_scaffold_65_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24109..25575
DNA (1467bp) protein (489aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C164_DELAS rbh
glucosamine--fructose-6-phosphate aminotransferase
13_1_40cm_3_scaffold_65_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25833..25988
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C163_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38526.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_65_24
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26028..26183
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WZT9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EZP48142.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
13_1_40cm_3_scaffold_65_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26465..28582)
DNA (2118bp) protein (706aa)
TonB-dependent siderophore receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C162_DELAS rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABX38525.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
TonB-dependent siderophore receptor
13_1_40cm_3_scaffold_65_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28678..29460)
DNA (783bp) protein (261aa)
Putative lipoprotein transmembrane n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C161_DELAS rbh
putative lipoprotein transmembrane rbh
Putative lipoprotein transmembrane {ECO:0000313|EMBL:ABX38524.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidov
13_1_40cm_3_scaffold_65_27
unknown

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29475..29612
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_3_scaffold_65_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29552..30364)
DNA (813bp) protein (271aa)
TonB-dependent siderophore receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C160_DELAS
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABX38523.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
Displaying 28 items

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