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13_1_40cm_3_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_72_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34..879)
DNA (846bp) protein (282aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP24_DELAS rbh
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABX38069.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_72_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(876..1928)
DNA (1053bp) protein (351aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP23_DELAS rbh
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABX38068.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" so
13_1_40cm_3_scaffold_72_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1944..2867)
DNA (924bp) protein (308aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Delftia RepID=A9BP22_DELAS rbh
ABC transporter permease
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX38067.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
13_1_40cm_3_scaffold_72_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2864..3826)
DNA (963bp) protein (321aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP21_DELAS rbh
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX38066.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
13_1_40cm_3_scaffold_72_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4135..4398
DNA (264bp) protein (88aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Delftia RepID=A9BP20_DELAS
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ABX38065.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sour
13_1_40cm_3_scaffold_72_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4403..5026)
DNA (624bp) protein (208aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=398578 species="Bacteria; Proteobacteria;
Peptidyl-tRNA hydrolase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=PTH_DELAS rbh
13_1_40cm_3_scaffold_72_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5153..5782)
DNA (630bp) protein (210aa)
50S ribosomal protein L25 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=RL25_DELAS rbh
50S ribosomal protein L25/general stress protein Ctc
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
13_1_40cm_3_scaffold_72_8
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5956..6891)
DNA (936bp) protein (312aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=2 Tax=Delftia RepID=A9BP17_DELAS rbh
13_1_40cm_3_scaffold_72_trna_3
unknown

Not on your lists

comp(6963..7036)
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_72_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7066..7929)
DNA (864bp) protein (288aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) rbh
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=ISPE_DELAS rbh
13_1_40cm_3_scaffold_72_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8000..8533)
DNA (534bp) protein (178aa)
Outer membrane lipoprotein LolB n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP15_DELAS rbh
outer membrane lipoprotein LolB
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovo
13_1_40cm_3_scaffold_72_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8545..10299)
DNA (1755bp) protein (585aa)
Tetratricopeptide TPR_4 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP14_DELAS rbh
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:ABX38059.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_72_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10394..11224
DNA (831bp) protein (277aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=2 Tax=Delftia RepID=A9BP13_DELAS rbh
13_1_40cm_3_scaffold_72_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11492..13558
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP12_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX38057.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_72_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13563..14633
DNA (1071bp) protein (357aa)
A/G-specific adenine glycosylase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP11_DELAS rbh
A/G-specific adenine glycosylase rbh
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ABX38056.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovor
13_1_40cm_3_scaffold_72_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14655..14897)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BP10_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38055.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
13_1_40cm_3_scaffold_72_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14894..16327)
DNA (1434bp) protein (478aa)
Inner membrane CreD family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP09_DELAS rbh
hypothetical protein rbh
Inner membrane CreD family protein {ECO:0000313|EMBL:ABX38054.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidov
13_1_40cm_3_scaffold_72_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16439..17899)
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Del
Histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP08_DELAS rbh
sensory histidine kinase CreC rbh
13_1_40cm_3_scaffold_72_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17916..18635)
DNA (720bp) protein (240aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP07_DELAS rbh
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX38052.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
13_1_40cm_3_scaffold_72_19
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18665..19567)
DNA (903bp) protein (301aa)
UPF0042 nucleotide-binding protein Daci_5422 n=2 Tax=Delftia RepID=Y5422_DELAS rbh
hypothetical protein
Nucleotide-binding protein BW39_05243 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
13_1_40cm_3_scaffold_72_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19572..21347)
DNA (1776bp) protein (592aa)
DNA repair protein RecN n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP05_DELAS rbh
DNA repair protein RecN rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
13_1_40cm_3_scaffold_72_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21350..22246)
DNA (897bp) protein (299aa)
NAD(+) kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=3 Tax=Delftia RepID=PPNK_DELAS rbh
13_1_40cm_3_scaffold_72_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22277..23281
DNA (1005bp) protein (335aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=HRCA_DELAS rbh
hrcA; heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D
13_1_40cm_3_scaffold_72_trna_1
unknown

Not on your lists

23349..23424
DNA (76bp)
transferRNA
13_1_40cm_3_scaffold_72_trna_2
unknown

Not on your lists

23605..23678
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_72_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23756..26125)
DNA (2370bp) protein (790aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Del
Histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BP02_DELAS rbh
histidine kinase
13_1_40cm_3_scaffold_72_24
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26153..27940)
DNA (1788bp) protein (596aa)
FecR protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AXX9_DELSC rbh
FecR protein rbh
FecR protein {ECO:0000313|EMBL:AEF88225.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (stra
13_1_40cm_3_scaffold_72_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27937..28650)
DNA (714bp) protein (238aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Delftia RepID=A9BP00_DELAS rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABX38045.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
13_1_40cm_3_scaffold_72_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28745..29827)
DNA (1083bp) protein (361aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNZ9_DELAS rbh
13_1_40cm_3_scaffold_72_27
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30037..30285)
DNA (249bp) protein (83aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNZ9_DELAS
Displaying items 1-30 of 37 in total

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