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13_1_40cm_3_scaffold_2048

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2048_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2..3316
DNA (3315bp) protein (1105aa)
Carbamoyl-phosphate synthase large chain {ECO:0000255|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000255|HAMAP-Rule:MF_01210
Carbamoyl-phosphate synthase large chain n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CARB_KORVE rbh
carbamoyl-phosphate synthase large subunit
13_1_40cm_3_scaffold_2048_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3387..4247
DNA (861bp) protein (287aa)
Dihydrodipicolinate synthetase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9V1_ACIC5
Dihydrodipicolinate synthetase family protein
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:ACO31616.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacteriu
13_1_40cm_3_scaffold_2048_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

4461..5138
DNA (678bp) protein (226aa)
TetR-family transcriptional regulator n=1 Tax=uncultured bacterium RepID=Q565X7_9BACT
bacterial regulatory, tetR family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
TetR family transcriptional regulator
13_1_40cm_3_scaffold_2048_4
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

5189..6010
DNA (822bp) protein (274aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55) Tax=RBG_16_Planctomycetes_43_13_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
Enoyl-CoA hydratase/isomerase id=1250364 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_3_scaffold_2048_5

Not on your lists

6026..7489
DNA (1464bp) protein (488aa)
Aldehyde Dehydrogenase id=1250363 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EQB63226.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
NAD-dependent aldehyde dehydrogenase
13_1_40cm_3_scaffold_2048_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7499..8674
DNA (1176bp) protein (392aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Benzoyl-CoA oxygenase component B id=1975393 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
boxB; Benzoyl-CoA oxygenase component B
13_1_40cm_3_scaffold_2048_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

8730..9533
DNA (804bp) protein (268aa)
coenzyme A transferase; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Coenzyme A transferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TTS3_DESML
coenzyme A transferase
13_1_40cm_3_scaffold_2048_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9572..10357
DNA (786bp) protein (262aa)
dch; dienoyl-CoA hydratase; K07537 cyclohexa-1,5-dienecarbonyl-CoA hydratase [EC:4.2.1.100] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Enoyl-CoA hydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV9_9BACT
dch; dienoyl-CoA hydratase
13_1_40cm_3_scaffold_2048_9
unknown

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10342..10779
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_3_scaffold_2048_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10772..11680
DNA (909bp) protein (303aa)
3-oxoadipate CoA-transferase (EC:2.8.3.6); K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Coenzyme A transferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V7G8_DESML rbh
hypothetical protein
13_1_40cm_3_scaffold_2048_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11777..12124
DNA (348bp) protein (116aa)
Rhodanese-related sulfurtransferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEG1_TERRK
Rhodanese-related sulfurtransferase
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:AFL87629.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain
13_1_40cm_3_scaffold_2048_12
unknown

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12135..12356
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_3_scaffold_2048_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12353..12844
DNA (492bp) protein (164aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein id=4696823 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
13_1_40cm_3_scaffold_2048_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12902..15427
DNA (2526bp) protein (842aa)
Xanthine dehydrogenase, molybdenum binding subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6J4K9_9RHOB
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:EJW11400.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_3_scaffold_2048_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15424..16428
DNA (1005bp) protein (335aa)
Molybdopterin dehydrogenase, FAD-binding protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFV6_9DELT id=5225105 bin=16ft_combo_ws3_JS1 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hcrB; 4-hydroxybenzoyl-CoA reductase, beta subunit Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
molybdopterin dehydrogenase protein
13_1_40cm_3_scaffold_2048_16
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

16485..17327
DNA (843bp) protein (281aa)
Amidohydrolase 2 n=1 Tax=mine drainage metagenome RepID=T1BXN0_9ZZZZ
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
amidohydrolase 2
13_1_40cm_3_scaffold_2048_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17426..18031)
DNA (606bp) protein (202aa)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=204669 species="Bacteria; Acidoba
GTP cyclohydrolase-2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPQ1_KORVE
GTP cyclohydrolase II
13_1_40cm_3_scaffold_2048_trna_1
unknown

Not on your lists

18156..18228
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_2048_18
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(18290..19510)
DNA (1221bp) protein (407aa)
Phage integrase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISL4_KORVE
integrase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
phage integrase
13_1_40cm_3_scaffold_2048_19
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(19820..20257)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
13_1_40cm_3_scaffold_2048_20
unknown

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20533..20793
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 21 items

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