ggKbase home page

13_1_40cm_3_scaffold_2000

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2000_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2..946
DNA (945bp) protein (315aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQI4_ROSCS
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABU59830.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseifle
13_1_40cm_3_scaffold_2000_2
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1122..1499
DNA (378bp) protein (126aa)
glyoxalase n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00035C11E8
glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase {ECO:0000313|EMBL:KIC67668.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
13_1_40cm_3_scaffold_2000_3
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1632..2042
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q3D3_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41974.1}; Flags: Precursor;; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nass
13_1_40cm_3_scaffold_2000_4
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2115..2471
DNA (357bp) protein (119aa)
Tax=BJP_08E140C01_Syntrophobacterales_43_19
13_1_40cm_3_scaffold_2000_5
unknown

Not on your lists

2527..2976
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_3_scaffold_2000_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3165..4310
DNA (1146bp) protein (382aa)
Citrate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPC3_KORVE
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ell
13_1_40cm_3_scaffold_2000_7
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4630..4848
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K864_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ27059.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_1_40cm_3_scaffold_2000_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4933..6108
DNA (1176bp) protein (392aa)
Aminotransferase, class V n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPC4_KORVE
class V aminotransferase
Aminotransferase, class V {ECO:0000313|EMBL:ABF41276.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
13_1_40cm_3_scaffold_2000_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6147..7259
DNA (1113bp) protein (371aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MNMA_KORVE rbh
mnmA; tRNA-specific 2-thiouridylase MnmA
13_1_40cm_3_scaffold_2000_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7256..7759)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41266.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2000_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7770..8081)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41265.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2000_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

8318..8746
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein id=12556624 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_2000_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8754..9482)
DNA (729bp) protein (243aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD7_KORVE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF41263.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
Displaying 13 items

View Taxonomy