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13_1_40cm_3_scaffold_2405

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2405_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(32..682)
DNA (651bp) protein (217aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00527}; EC=3.2.2.- {ECO:0000255|HAMAP-Rule:MF_00527};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteri
Putative 3-methyladenine DNA glycosylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=3MGH_KORVE
DNA-3-methyladenine glycosylase
13_1_40cm_3_scaffold_2405_2
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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780..1346
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003759220
transport-associated protein
Transport-associated protein {ECO:0000313|EMBL:AEU36023.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain A
13_1_40cm_3_scaffold_2405_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1501..1776)
DNA (276bp) protein (92aa)
peroxiredoxin n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003637AD1
peroxiredoxin bcp
Putative peroxiredoxin bcp {ECO:0000313|EMBL:ACO32085.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strai
13_1_40cm_3_scaffold_2405_4
unknown

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1829..3310
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003629361
hypothetical protein
13_1_40cm_3_scaffold_2405_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3321..3938)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN87_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41663.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2405_6
unknown

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comp(4160..4357)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_3_scaffold_2405_7
unknown

Not on your lists

comp(4306..4740)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_3_scaffold_2405_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4858..6336)
DNA (1479bp) protein (493aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHD5_KORVE rbh
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
13_1_40cm_3_scaffold_2405_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6373..6945)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHD4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43716.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_2405_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7125..8468
DNA (1344bp) protein (448aa)
Three-deoxy-D-manno-octulosonic-acid transferase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHD3_KORVE
3-deoxy-D-manno-octulosonic-acid transferase
Three-deoxy-D-manno-octulosonic-acid transferase-like protein {ECO:0000313|EMBL:ABF43717.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;
13_1_40cm_3_scaffold_2405_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8465..9409
DNA (945bp) protein (315aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; TaxID=204669 species="Bacteria;
Tetraacyldisaccharide 4'-kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=LPXK_KORVE
lipid-A-disaccharide synthase
13_1_40cm_3_scaffold_2405_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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9406..10431
DNA (1026bp) protein (342aa)
hldE; D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PfkB domain protein id=4143312 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribokinase-like domain-containing protein
13_1_40cm_3_scaffold_2405_13
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

10382..10888
DNA (507bp) protein (169aa)
Cytidyltransferase-related domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC4_CHLTF
cytidyltransferase-related domain-containing protein
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:AEP11344.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium
13_1_40cm_3_scaffold_2405_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10891..11988
DNA (1098bp) protein (366aa)
rfaC; lipopolysaccharide heptosyltransferase I (EC:2.-.-.-)
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:ACO32682.1}; EC=2.-.-.- {ECO:0000313|EMBL:ACO32682.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; A
Lipopolysaccharide heptosyltransferase I n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F752_ACIC5 rbh
13_1_40cm_3_scaffold_2405_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11981..12526
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHC9_KORVE
S-isoprenylcysteine methyltransferase-like protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43721.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2405_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12618..13388
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHC8_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43722.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_2405_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13464..15065)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003780E92 rbh
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABF41243.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_1_40cm_3_scaffold_2405_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15240..15509)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHC7_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43723.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2405_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15798..16118
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39146.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_2405_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16096..16878)
DNA (783bp) protein (261aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF5_KORVE
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:ABF39145.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" so
13_1_40cm_3_scaffold_2405_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16856..18304)
DNA (1449bp) protein (483aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF5_KORVE
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:ABF39145.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" so
13_1_40cm_3_scaffold_2405_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18709..19425)
DNA (717bp) protein (239aa)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:ABF39143.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABF39143.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF7_KORVE
(uracil-5)-methyltransferase
Displaying 22 items

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