ggKbase home page

13_1_40cm_3_scaffold_387

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_387_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2..157
DNA (156bp) protein (52aa)
DinB family protein {ECO:0000313|EMBL:ABJ88309.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_1_40cm_3_scaffold_387_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(215..862)
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64153.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_3_scaffold_387_3
unknown

Not on your lists

comp(1056..1502)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_3_scaffold_387_4
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1859..2350)
DNA (492bp) protein (164aa)
Transposase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZL48_TERRK
transposase
Transposase {ECO:0000313|EMBL:AFL89966.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-4159
13_1_40cm_3_scaffold_387_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2369..2923)
DNA (555bp) protein (185aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPH5_KORVE
magnesium and cobalt transport protein CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_1_40cm_3_scaffold_387_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3099..5258)
DNA (2160bp) protein (720aa)
Prolyl oligopeptidase {ECO:0000313|EMBL:CDM65963.1}; EC=3.4.21.26 {ECO:0000313|EMBL:CDM65963.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7Y4_SPHTD rbh
13_1_40cm_3_scaffold_387_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5449..6261
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035E3B21
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
13_1_40cm_3_scaffold_387_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6273..7193
DNA (921bp) protein (307aa)
von Willebrand factor, type A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPZ1_KORVE rbh
von Willebrand factor type A domain-containing protein
von Willebrand factor, type A {ECO:0000313|EMBL:ABF41059.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_1_40cm_3_scaffold_387_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7613..11281
DNA (3669bp) protein (1223aa)
TonB-denpendent receptor n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5A1C0
Carboxypeptidase regulatory-like domain {ECO:0000313|EMBL:CDM65164.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogene
TonB-dependent receptor plug
13_1_40cm_3_scaffold_387_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11400..11612
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPZ0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41060.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_387_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11662..12513
DNA (852bp) protein (284aa)
Inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:ABF41061.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ABF41061.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidat
Inositol-1(Or 4)-monophosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPY9_KORVE rbh
inositol-1(or 4)-monophosphatase
13_1_40cm_3_scaffold_387_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

12537..14618
DNA (2082bp) protein (694aa)
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=GWC2_Gemmatimonadetes_71_10_curated
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33)
3-isopropylmalate dehydratase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G0G3_SORC5
13_1_40cm_3_scaffold_387_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14701..14961
DNA (261bp) protein (87aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A86_SOLUE
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABJ82040.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter
13_1_40cm_3_scaffold_387_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15112..15855
DNA (744bp) protein (248aa)
DNA repair protein RecO n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RECO_KORVE rbh
DNA repair protein RecO
DNA repair protein RecO {ECO:0000255|HAMAP-Rule:MF_00201}; Recombination protein O {ECO:0000255|HAMAP-Rule:MF_00201}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae
13_1_40cm_3_scaffold_387_15

Not on your lists

16042..16983
DNA (942bp) protein (314aa)
Glycyl-tRNA synthetase, alpha chain {ECO:0000313|EMBL:CBI07550.1}; EC=6.1.1.14 {ECO:0000313|EMBL:CBI07550.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" sour
Glycyl-tRNA synthetase, alpha chain n=1 Tax=mine drainage metagenome RepID=E6QJY3_9ZZZZ
glyQ; glycyl-tRNA synthetase subunit alpha
13_1_40cm_3_scaffold_387_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17003..19147
DNA (2145bp) protein (715aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
Glycyl-tRNA synthetase beta chain n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISF2_KORVE
glycine--tRNA ligase subunit beta
13_1_40cm_3_scaffold_387_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19210..21015
DNA (1806bp) protein (602aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:ABF40199.1}; EC=2.7.9.1 {ECO:0000313|EMBL:ABF40199.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
Pyruvate phosphate dikinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISF1_KORVE
pyruvate phosphate dikinase
Displaying 17 items

View Taxonomy