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13_1_40cm_3_scaffold_6394

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6394_1
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1..648
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B2F8_TURPD
hypothetical protein
Tax=BJP_IG2069_Spirochaetales_48_31
13_1_40cm_3_scaffold_6394_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

860..1609
DNA (750bp) protein (250aa)
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:ABF39717.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ABF39717.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidoba
Branched chain amino acid aminotransferase apoenzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITT3_KORVE
branched chain amino acid aminotransferase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase
13_1_40cm_3_scaffold_6394_3
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1816..2208)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070017 RepID=L0QYC7_9MYCO
Conserved protein of unknown function, probable VapC16-like toxin (part2)
twitching motility protein PilT Tax=CG_Anaero_01
13_1_40cm_3_scaffold_6394_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2205..2480)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002D3ECD4
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
antitoxin of toxin-antitoxin system, phd type
13_1_40cm_3_scaffold_6394_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2648..3775
DNA (1128bp) protein (376aa)
Twitching motility protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITU1_KORVE
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ABF39709.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
13_1_40cm_3_scaffold_6394_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4005..4463
DNA (459bp) protein (153aa)
Regulatory protein RecX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITU2_KORVE
regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
13_1_40cm_3_scaffold_6394_7
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


4567..7008
DNA (2442bp) protein (814aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WYK5_ACISM
alanyl-tRNA synthetase
13_1_40cm_3_scaffold_6394_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7005..7325
DNA (321bp) protein (107aa)
Alanine--tRNA ligase; EC=6.1.1.7;; Alanyl-tRNA synthetase; Short=AlaRS;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
Alanine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=SYA_KORVE
alanyl-tRNA synthetase
13_1_40cm_3_scaffold_6394_9
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

7361..7723
DNA (363bp) protein (121aa)
hypothetical protein Tax=RBG_13_Nitrospirae_39_12_curated
13_1_40cm_3_scaffold_6394_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7871..8983)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000369D06B
Rieske 2Fe-2S domain-containing protein
Rieske 2Fe-2S domain protein {ECO:0000313|EMBL:ACO34147.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (str
13_1_40cm_3_scaffold_6394_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9288..10136
DNA (849bp) protein (283aa)
Lytic transglycosylase, catalytic n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISJ3_KORVE
lytic transglycosylase, catalytic
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABF40157.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
13_1_40cm_3_scaffold_6394_12
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10220..12298
DNA (2079bp) protein (693aa)
cell wall hydrolase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036C6F44 rbh
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEU38078.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain
13_1_40cm_3_scaffold_6394_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12412..13233
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISJ5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40155.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_6394_trna_1
unknown

Not on your lists

13884..13957
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_6394_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14092..16422
DNA (2331bp) protein (777aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
tuaD; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F289_ACIC5 rbh
13_1_40cm_3_scaffold_6394_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16419..17477)
DNA (1059bp) protein (353aa)
Type IV pilus assembly PilZ n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM06_KORVE
response regulator receiver protein
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABF42094.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_1_40cm_3_scaffold_6394_16
unknown

Not on your lists

17669..18085
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_3_scaffold_6394_17
unknown

Not on your lists

comp(18169..18735)
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_3_scaffold_6394_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18834..19454
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BW2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81454.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_3_scaffold_6394_19
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19519..20160
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IXS2_DEIGD
HAD family hydrolase
HAD-superfamily hydrolase subfamily IA, variant 3 {ECO:0000313|EMBL:ABF45962.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="
13_1_40cm_3_scaffold_6394_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20241..21248)
DNA (1008bp) protein (336aa)
hypothetical protein; K01822 steroid delta-isomerase [EC:5.3.3.1] Tax=GWA2_Rokubacteria_70_23_curated
Mlr2180 protein id=4835172 bin=GWC2_Methylomirabilis_70_24 species=Mesorhizobium loti genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_3_scaffold_6394_21
unknown

Not on your lists

comp(21292..21738)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_3_scaffold_6394_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22005..23102
DNA (1098bp) protein (366aa)
Oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL19_KORVE rbh
oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:ABF42431.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin34
13_1_40cm_3_scaffold_6394_23
unknown

Not on your lists

comp(23204..24613)
DNA (1410bp) protein (470aa)

This feature has no annotations

Displaying 24 items

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