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13_1_40cm_3_scaffold_89

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Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_89_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..441)
DNA (441bp) protein (147aa)
Oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22) Tax=GWC2_Gemmatimonadetes_71_10_curated
Lysophospholipase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJP6_SINAD
EstX protein
13_1_40cm_3_scaffold_89_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(438..1691)
DNA (1254bp) protein (418aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT
protein of unknown function DUF224 cysteine-rich region domain protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_89_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1688..2896)
DNA (1209bp) protein (403aa)
Glycolate oxidase subunit n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NCA8_GLOVI
glcE; glycolate oxidase subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
FAD linked oxidase domain-containing protein
13_1_40cm_3_scaffold_89_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2893..4317)
DNA (1425bp) protein (475aa)
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT
FAD linked oxidase domain protein
13_1_40cm_3_scaffold_89_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4423..5268)
DNA (846bp) protein (282aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
13_1_40cm_3_scaffold_89_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5545..6648)
DNA (1104bp) protein (368aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y5_GEMAT
3-dehydroquinate synthase
13_1_40cm_3_scaffold_89_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6645..7175)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y6_GEMAT
ATP/cobalamin adenosyltransferase
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AHG90070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_89_8
unknown

Not on your lists

comp(7191..8111)
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_40cm_3_scaffold_89_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8127..9149
DNA (1023bp) protein (341aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
putative oxidoreductase
13_1_40cm_3_scaffold_89_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9146..10636)
DNA (1491bp) protein (497aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJV1_RHOM4
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase
13_1_40cm_3_scaffold_89_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10602..11522)
DNA (921bp) protein (307aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_89_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11519..12910)
DNA (1392bp) protein (464aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_89_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13032..15293
DNA (2262bp) protein (754aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen (D15)
13_1_40cm_3_scaffold_89_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15293..19702
DNA (4410bp) protein (1470aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_89_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19703..20632
DNA (930bp) protein (310aa)
Diacylglycerol kinase catalytic region n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLF9_ROSCS
diacylglycerol kinase catalytic subunit; K07029 Tax=RBG_16_Gemmatimonadetes_66_8_curated
diacylglycerol kinase catalytic subunit
13_1_40cm_3_scaffold_89_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20625..21968
DNA (1344bp) protein (448aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMS4_9BACT
acetoacetate metabolism regulatory protein AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_40cm_3_scaffold_89_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21986..22168
DNA (183bp) protein (61aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_89_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22165..22779)
DNA (615bp) protein (205aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
response regulator receiver
13_1_40cm_3_scaffold_89_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22816..23733
DNA (918bp) protein (306aa)
Peptidase S58 DmpA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G670_CHLAD
peptidase S58 DmpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase S58 DmpA
13_1_40cm_3_scaffold_89_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23726..24718
DNA (993bp) protein (331aa)
NlpC/P60 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z3_GEMAT
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:BAH37653.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_89_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24772..25473
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034C0CA3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_89_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25470..26054
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FEZ1_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90090.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_89_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26051..26800
DNA (750bp) protein (250aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_89_24
unknown

Not on your lists

26800..27120
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_3_scaffold_89_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

27171..27503
DNA (333bp) protein (111aa)
holo-acyl-carrier-protein synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YNB5_9BACT
holo-acyl-carrier-protein synthase
13_1_40cm_3_scaffold_89_26
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

27535..29310
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003771BE8
Putative Iron permease FTR1, contains cytochrome c region {ECO:0000313|EMBL:CCQ91610.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source=
iron permease FTR1
13_1_40cm_3_scaffold_89_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(29275..30120)
DNA (846bp) protein (282aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A600_GEMAT
13_1_40cm_3_scaffold_89_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(30117..31160)
DNA (1044bp) protein (348aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TSAD_GEMAT
O-sialoglycoprotein endopeptidase
13_1_40cm_3_scaffold_89_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(31153..32109)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AYD7_KROS4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_89_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(32085..32606)
DNA (522bp) protein (174aa)
Thiol-disulfide oxidoreductase ResA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A602_GEMAT
resA; thiol-disulfide oxidoreductase ResA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Displaying items 1-30 of 81 in total

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