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13_1_40cm_3_scaffold_1849

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1849_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(28..1140)
DNA (1113bp) protein (371aa)
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428669 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_1849_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1278..2495
DNA (1218bp) protein (406aa)
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
Transcription termination factor Rho id=1249870 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_3_scaffold_1849_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2492..2929
DNA (438bp) protein (146aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_1_40cm_3_scaffold_1849_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2941..3915
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1849_5
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3866..4462)
DNA (597bp) protein (199aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q7C4_9DELT
thiE; thiamine-phosphate pyrophosphorylase
13_1_40cm_3_scaffold_1849_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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4488..4883
DNA (396bp) protein (132aa)
putative prephenate dehydratase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=CG_Anaero_02
Chorismate mutase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVT5_ROSS1
chorismate mutase
13_1_40cm_3_scaffold_1849_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4880..6055
DNA (1176bp) protein (392aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
13_1_40cm_3_scaffold_1849_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6084..6962
DNA (879bp) protein (293aa)
cation transporter n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002FE3B55
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation diffusion facilitator family transporter
13_1_40cm_3_scaffold_1849_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6956..7813
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1849_10
unknown

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7932..8096
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_3_scaffold_1849_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8210..11164
DNA (2955bp) protein (985aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Formate dehydrogenase, alpha subunit n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS75_KRIFD rbh
formate dehydrogenase subunit alpha
13_1_40cm_3_scaffold_1849_12
unknown

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comp(11502..11759)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_3_scaffold_1849_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12137..13024
DNA (888bp) protein (296aa)
threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
threonine 3-dehydrogenase (EC:1.1.1.103)
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Displaying 13 items

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