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13_1_40cm_3_scaffold_5589

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5589_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..770)
DNA (768bp) protein (256aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X0_GEMAT
13_1_40cm_3_scaffold_5589_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(818..1804)
DNA (987bp) protein (329aa)
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X1_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 3
13_1_40cm_3_scaffold_5589_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1801..2808)
DNA (1008bp) protein (336aa)
plsX; fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphate acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X2_GEMAT
Phosphate acyltransferase
13_1_40cm_3_scaffold_5589_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(2810..2989)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL32_GEMAT
rpmF; 50S ribosomal protein L32 Tax=GWC2_Gemmatimonadetes_71_10_curated
50S ribosomal protein L32
13_1_40cm_3_scaffold_5589_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3088..3468)
DNA (381bp) protein (127aa)
protein of unknown function DUF177
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_5589_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3503..3922)
DNA (420bp) protein (140aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nucleoside diphosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X5_GEMAT
nucleoside diphosphate kinase
13_1_40cm_3_scaffold_5589_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3924..4832)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CBS domain containing protein
13_1_40cm_3_scaffold_5589_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4829..5698)
DNA (870bp) protein (290aa)
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X7_GEMAT
13_1_40cm_3_scaffold_5589_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5695..6828)
DNA (1134bp) protein (378aa)
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT
Succinyl-CoA ligase [ADP-forming] subunit beta
13_1_40cm_3_scaffold_5589_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6825..7250)
DNA (426bp) protein (142aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carbamate kinase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDD3_9CLOT
cpkA; carbamyl-phosphate synthetase, carbamate kinase-like
13_1_40cm_3_scaffold_5589_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7247..7738)
DNA (492bp) protein (164aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbamate kinase (EC:2.7.2.2)
carbamate kinase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A14E9B
13_1_40cm_3_scaffold_5589_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7750..9474)
DNA (1725bp) protein (575aa)
UPF0182 protein CPCC7001_1937 n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIF1_9CHRO
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_5589_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10192..11574)
DNA (1383bp) protein (461aa)
manB; phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphomannomutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y0_GEMAT
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
13_1_40cm_3_scaffold_5589_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11589..12899)
DNA (1311bp) protein (437aa)
nuoN; NADH-quinone oxidoreductase chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=NUON_GEMAT
NAD(P)H-quinone oxidoreductase subunit 2
13_1_40cm_3_scaffold_5589_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13086..14594)
DNA (1509bp) protein (503aa)
NADH dehydrogenase subunit M (EC:1.6.5.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.99.5 1.6.5.3)
NADH dehydrogenase I subunit M id=1250619 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_3_scaffold_5589_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14598..16577)
DNA (1980bp) protein (660aa)
nuoL; NADH-quinone oxidoreductase chain L (EC:1.6.99.5) Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y3_GEMAT
proton-translocating NADH-quinone oxidoreductase, chain L
13_1_40cm_3_scaffold_5589_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16577..16873)
DNA (297bp) protein (99aa)
nuoK; NADH dehydrogenase I subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH:ubiquinone oxidoreductase subunit K n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6B929
NAD(P)H-quinone oxidoreductase subunit 4L
13_1_40cm_3_scaffold_5589_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16874..17395)
DNA (522bp) protein (174aa)
nuoJ; NADH-quinone oxidoreductase chain J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase chain J n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y5_GEMAT
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_40cm_3_scaffold_5589_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17399..17905)
DNA (507bp) protein (169aa)
nuoI; NADH-quinone oxidoreductase chain I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y6_GEMAT
NAD(P)H-quinone oxidoreductase subunit I
13_1_40cm_3_scaffold_5589_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17905..19068)
DNA (1164bp) protein (388aa)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NADH-quinone oxidoreductase subunit H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT
NAD(P)H-quinone oxidoreductase subunit 1
13_1_40cm_3_scaffold_5589_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19065..19964)
DNA (900bp) protein (300aa)
nuoG; putative NADH-quinone oxidoreductase chain G (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative NADH-quinone oxidoreductase chain G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
Displaying 21 items

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