ggKbase home page

13_1_40cm_3_scaffold_10117

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_10117_1
unknown

Not on your lists

2..1111
DNA (1110bp) protein (370aa)

This feature has no annotations

13_1_40cm_3_scaffold_10117_2
unknown

Not on your lists

comp(1134..1562)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_3_scaffold_10117_3
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1605..2777)
DNA (1173bp) protein (391aa)
lepB; signal peptidase i (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae;
Signal peptidase I n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMN5_STIAD
13_1_40cm_3_scaffold_10117_4
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2774..4582)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=LEPA_ANADE rbh
GTP-binding protein LepA
13_1_40cm_3_scaffold_10117_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4649..5104)
DNA (456bp) protein (152aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMN2_STIAD
NAD-dependent epimerase/dehydratase family protein
Nucleotide sugar dehydratase {ECO:0000313|EMBL:EAU61889.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source
13_1_40cm_3_scaffold_10117_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5538..5897)
DNA (360bp) protein (120aa)
Cupin domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C839_MYXFH
cupin Tax=RBG_16_Anaeromyxobacter_69_14_curated
cupin domain-containing protein
13_1_40cm_3_scaffold_10117_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5900..6169)
DNA (270bp) protein (90aa)
Sporulation domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP3_ANADF
Gliding motility protein {ECO:0000313|EMBL:AKF81897.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoc
sporulation domain-containing protein
13_1_40cm_3_scaffold_10117_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6553..8322)
DNA (1770bp) protein (590aa)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
Arginine--tRNA ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=SYR_ANADE rbh
argS; arginyl-tRNA synthetase
13_1_40cm_3_scaffold_10117_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8316..8822)
DNA (507bp) protein (169aa)
Histidine triad (HIT) protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP6_ANADF
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABS26492.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
13_1_40cm_3_scaffold_10117_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8822..9772)
DNA (951bp) protein (317aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.2); K04773 protease IV [EC:3.4.21.-] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Signal peptide peptidase SppA, 36K type n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP7_ANADF
signal peptide peptidase SppA, 36K type
13_1_40cm_3_scaffold_10117_11
unknown

Not on your lists

9854..10288
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_3_scaffold_10117_12
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(10297..11802)
DNA (1506bp) protein (502aa)
Glr0176 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NP81_GLOVI
hypothetical protein
Glr0176 protein {ECO:0000313|EMBL:BAC88117.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_3_scaffold_10117_13
unknown

Not on your lists

11919..12827
DNA (909bp) protein (303aa)

This feature has no annotations

13_1_40cm_3_scaffold_10117_14
unknown

Not on your lists

13258..13470
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_3_scaffold_10117_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14247..14711)
DNA (465bp) protein (155aa)
Enoyl-CoA hydratase (EC:4.2.1.17)
Acyl dehydratase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q316_9DELT
Dehydratase {ECO:0000313|EMBL:KFA91475.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter vi
13_1_40cm_3_scaffold_10117_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14783..16924)
DNA (2142bp) protein (714aa)
Amino acid transporter-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JEH0_ANAD2
amino acid transporter-like protein
Amino acid transporter-like protein {ECO:0000313|EMBL:ACL64296.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
13_1_40cm_3_scaffold_10117_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17125..18417
DNA (1293bp) protein (431aa)
Sigma-54 dependent DNA-binding response regulator n=2 Tax=Myxococcus xanthus RepID=Q1DFW8_MYXXD
sigma-54 dependent DNA-binding response regulator; K11384 two-component system, NtrC family, response regulator AlgB Tax=RBG_16_Anaeromyxobacter_69_14_curated
Fis family transcriptional regulator
13_1_40cm_3_scaffold_10117_18
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18519..20351)
DNA (1833bp) protein (611aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cys
Sensory box histidine kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U0X7_MYXSD rbh
sensory box histidine kinase
13_1_40cm_3_scaffold_10117_19
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20348..21490)
DNA (1143bp) protein (381aa)
Osmosensitive K+ channel histidine kinase KdpD protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SJ71_9DELT rbh
Osmosensitive K+ channel histidine kinase KdpD {ECO:0000313|EMBL:KFE68395.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
osmosensitive K+ channel histidine kinase sensor subunit
13_1_40cm_3_scaffold_10117_20
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22102..24177)
DNA (2076bp) protein (692aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWC0_CORCM rbh
kdpB; K+-transporting ATPase subunit B
13_1_40cm_3_scaffold_10117_21
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24178..25902)
DNA (1725bp) protein (575aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=2 Tax=Myxococcus xanthus RepID=Q1DFX6_MYXXD rbh
13_1_40cm_3_scaffold_10117_22
unknown

Not on your lists

comp(25902..25991)
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_3_scaffold_10117_23
unknown

Not on your lists

comp(26251..26376)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 23 items

View Taxonomy