ggKbase home page

13_1_40cm_3_scaffold_5151

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5151_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..909)
DNA (909bp) protein (303aa)
Response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D4L6_MYXXD rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KFA92631.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
response regulator
13_1_40cm_3_scaffold_5151_2
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1032..3425
DNA (2394bp) protein (798aa)
aldehyde dehydrogenase (EC:1.2.1.-); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=CG_Delta_07
aldehyde dehydrogenase (EC:1.2.1.-)
AmbN n=1 Tax=Sorangium cellulosum RepID=A1YBR4_SORCE rbh
13_1_40cm_3_scaffold_5151_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3483..4895
DNA (1413bp) protein (471aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacter
Dihydrolipoyl dehydrogenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PHY8_9DELT
alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase
13_1_40cm_3_scaffold_5151_4
unknown

Not on your lists

4958..5191
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_3_scaffold_5151_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5239..6195
DNA (957bp) protein (319aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAF5_MYXSD rbh
lipoyl synthase
13_1_40cm_3_scaffold_5151_6
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6165..7139
DNA (975bp) protein (325aa)
Transketolase domain protein n=2 Tax=Anaeromyxobacter RepID=B4UC31_ANASK rbh
transketolase
Transketolase domain protein {ECO:0000313|EMBL:ACG73262.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_1_40cm_3_scaffold_5151_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7141..8463
DNA (1323bp) protein (441aa)
alpha keto acid dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Alpha keto acid dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:ADO72448.1}; EC=2.3.1.12 {ECO:0000313|EMBL:ADO72448.1};; TaxID=378806 species="Bacteria; Prote
Alpha keto acid dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3G055_STIAD rbh
13_1_40cm_3_scaffold_5151_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8512..9576
DNA (1065bp) protein (355aa)
3-methyl-2-oxobutanoate dehydrogenase subunit alpha n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8J8_SORCE rbh
3-methyl-2-oxobutanoate dehydrogenase subunit alpha
3-methyl-2-oxobutanoate dehydrogenase subunit alpha {ECO:0000313|EMBL:AGP41204.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sora
13_1_40cm_3_scaffold_5151_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9590..10645
DNA (1056bp) protein (352aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218471}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218470};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=2 Tax=Myxococcus xanthus RepID=LIPB_MYXXA rbh
lipB; lipoate-protein ligase B
13_1_40cm_3_scaffold_5151_10
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10715..11518
DNA (804bp) protein (268aa)
TPR domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DD69_MYXXD
TPR domain-containing protein
TPR domain protein {ECO:0000313|EMBL:ABF88149.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus x
13_1_40cm_3_scaffold_5151_11
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11484..12134)
DNA (651bp) protein (217aa)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=1406225 species="Bacteria; Proteo
ribA; GTP cyclohydrolase-2 (EC:3.5.4.25)
GTP cyclohydrolase-2 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q095W2_STIAD
13_1_40cm_3_scaffold_5151_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12261..12623
DNA (363bp) protein (121aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococca
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J839_ANAD2
queuosine biosynthesis protein QueD
13_1_40cm_3_scaffold_5151_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12695..13165
DNA (471bp) protein (157aa)
GTP cyclohydrolase I n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QG91_9DELT
GTP cyclohydrolase I {ECO:0000313|EMBL:EPX55403.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cysto
folE; GTP cyclohydrolase I
13_1_40cm_3_scaffold_5151_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13275..13739
DNA (465bp) protein (155aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB80_ANASK
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Anaeromyxobacter_69_14_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_3_scaffold_5151_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13736..15091
DNA (1356bp) protein (452aa)
FAD linked oxidase domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBJ7_ANADF rbh
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABS26093.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxob
13_1_40cm_3_scaffold_5151_16
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15280..15939
DNA (660bp) protein (220aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CYD9_MYXXD
ECF subfamily RNA polymerase sigma factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABF86858.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococ
13_1_40cm_3_scaffold_5151_17
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16037..16354
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULE3_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF83706.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_40cm_3_scaffold_5151_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16464..17678
DNA (1215bp) protein (405aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=404589 species="Bacteria; Proteobacteria; Delt
Ribonuclease R n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAA8_ANADF
ribonuclease R
13_1_40cm_3_scaffold_5151_19
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17803..18828
DNA (1026bp) protein (342aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=404589 species="Bacteria; Proteobacteria; Delt
Ribonuclease R n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAA8_ANADF
ribonuclease R
13_1_40cm_3_scaffold_5151_20
unknown

Not on your lists

comp(18701..18997)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_3_scaffold_5151_21
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19075..20613
DNA (1539bp) protein (513aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9X2_ANAD2
13_1_40cm_3_scaffold_5151_22
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20657..23878
DNA (3222bp) protein (1074aa)
Maltooligosyltrehalose synthase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CB50_MYXFH
maltooligosyltrehalose synthase
Maltooligosyltrehalose synthase {ECO:0000313|EMBL:AEI62155.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source=
13_1_40cm_3_scaffold_5151_23
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24262..24909
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G4V2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EWS52847.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
13_1_40cm_3_scaffold_5151_24
unknown

Not on your lists

comp(24944..25180)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_3_scaffold_5151_25
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25551..27932)
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00278007};; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaprote
Endonuclease MutS2 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKL1_ANADE rbh
DNA mismatch repair protein MutS-like protein
13_1_40cm_3_scaffold_5151_26
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28116..28766
DNA (651bp) protein (217aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J532_ANAD2
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACL64887.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteracea
13_1_40cm_3_scaffold_5151_27
unknown

Not on your lists

28829..28966
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_3_scaffold_5151_28
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28999..29637)
DNA (639bp) protein (213aa)
FHA domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UEK3_MYXSD
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AGC46037.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="
13_1_40cm_3_scaffold_5151_29
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30423..31703
DNA (1281bp) protein (427aa)
Serine/threonine protein kinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N072_CORCM
pkn3; serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFE09877.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" sou
13_1_40cm_3_scaffold_5151_30
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31760..33187)
DNA (1428bp) protein (476aa)
FHA domain containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKZ6_ANADE
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ABC82321.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
Displaying items 1-30 of 31 in total

View Taxonomy