ggKbase home page

13_1_40cm_3_scaffold_8481

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_8481_1
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
DivIVA domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPM2_GEOS8
divIVA; cell-division initiation protein DivIVA; K04074 cell division initiation protein Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
DivIVA domain-containing protein
13_1_40cm_3_scaffold_8481_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263..1258)
DNA (996bp) protein (332aa)
GAF/GGDEF domain protein {ECO:0000313|EMBL:KFE64626.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hya
Diguanylate cyclase with GAF sensor id=3788027 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
cph2C; GAF/GGDEF domain-containing protein
13_1_40cm_3_scaffold_8481_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1373..1927
DNA (555bp) protein (185aa)
Maf-like protein Anae109_1366 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=Y1366_ANADF
maf protein
Maf-like protein Anae109_1366 {ECO:0000255|HAMAP-Rule:MF_00528}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxob
13_1_40cm_3_scaffold_8481_4
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1918..2535
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D913_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF90783.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_3_scaffold_8481_5
unknown

Not on your lists

2532..3449
DNA (918bp) protein (306aa)

This feature has no annotations

13_1_40cm_3_scaffold_8481_6
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3492..5225
DNA (1734bp) protein (578aa)
Aldehyde dehydrogenase, thermostable {ECO:0000313|EMBL:KJF24818.1}; EC=1.2.1.5 {ECO:0000313|EMBL:KJF24818.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococ
aldehyde dehydrogenase n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034C39CA
putative NAD-dependent aldehyde dehydrogenase
13_1_40cm_3_scaffold_8481_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5240..6418
DNA (1179bp) protein (393aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA50_ANADF
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABS25596.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromy
13_1_40cm_3_scaffold_8481_8
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6409..7821
DNA (1413bp) protein (471aa)
Sarcosine oxidase, beta subunit family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FVK2_STIAD rbh
sarcosine oxidase subunit beta family protein
Sarcosine oxidase subunit beta family protein {ECO:0000313|EMBL:AGC45259.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxoco
13_1_40cm_3_scaffold_8481_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7925..8752
DNA (828bp) protein (276aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QHB9_9DELT
13_1_40cm_3_scaffold_8481_10
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8775..9137
DNA (363bp) protein (121aa)
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A3Y7_METMM
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein {ECO:0000313|EMBL:AEG02759.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methy
13_1_40cm_3_scaffold_8481_11
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(9145..9537)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7VBQ0_DESML
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_3_scaffold_8481_12
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9718..11325)
DNA (1608bp) protein (536aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterine
Peptidylprolyl cis-trans isomerase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CEK9_MYXFH rbh
peptidylprolyl cis-trans isomerase
13_1_40cm_3_scaffold_8481_13
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11479..12354
DNA (876bp) protein (292aa)
Cell shape-determining protein MreC n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8D0_MYXSD
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxo
13_1_40cm_3_scaffold_8481_14
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12351..12863
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D908_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:AKF80938.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_40cm_3_scaffold_8481_15
unknown

Not on your lists

12860..13018
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_3_scaffold_8481_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13015..14736
DNA (1722bp) protein (574aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ABS25577.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABS25577.1};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystoba
Peptidoglycan glycosyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA31_ANADF
peptidoglycan glycosyltransferase
13_1_40cm_3_scaffold_8481_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14721..15830
DNA (1110bp) protein (370aa)
Rod shape-determining protein RodA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA32_ANADF rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RBG_16_Anaeromyxobacter_69_14_curated
rod shape-determining protein RodA
13_1_40cm_3_scaffold_8481_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15858..16187)
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Geobacter sp. (strain M21) RepID=C6DYY4_GEOSM
thioredoxin; K03671 thioredoxin 1 Tax=RBG_16_Anaeromyxobacter_69_14_curated
thioredoxin
13_1_40cm_3_scaffold_8481_19
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16343..16807
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=B4UJ30_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL64801.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_8481_20
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16819..17649
DNA (831bp) protein (277aa)
Cytochrome C assembly family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U672_MYXSD
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AKF80945.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
cytochrome C assembly family protein
13_1_40cm_3_scaffold_8481_21
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17646..18923
DNA (1278bp) protein (426aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JHA1_ANAD2
13_1_40cm_3_scaffold_8481_22
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18924..19925
DNA (1002bp) protein (334aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
porphobilinogen deaminase n=1 Tax=Halomonas lutea RepID=UPI0003757CCB
porphobilinogen deaminase
13_1_40cm_3_scaffold_8481_23
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

19922..20650
DNA (729bp) protein (243aa)
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_3_scaffold_8481_24
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20661..21026
DNA (366bp) protein (122aa)
Response regulator {ECO:0000313|EMBL:EKE97506.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
response regulator receiver protein
DNA-binding response regulator in two-component regulatory system with PhoR (Or CreC) id=3304140 bin=GWA2_Elusimicrobia_69_24 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_3_scaffold_8481_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21023..21532
DNA (510bp) protein (170aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXA8_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN97068.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
13_1_40cm_3_scaffold_8481_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21487..22185)
DNA (699bp) protein (233aa)
Succinate dehydrogenase cytochrome b558 subunit n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QV51_9DELT
Succinate dehydrogenase cytochrome b558 subunit {ECO:0000313|EMBL:EPX60533.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; C
succinate dehydrogenase cytochrome b558 subunit
13_1_40cm_3_scaffold_8481_27
unknown

Not on your lists

comp(22406..23020)
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_3_scaffold_8481_28
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23059..24126
DNA (1068bp) protein (356aa)
DNA polymerase III delta prime subunit n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QPT7_9DELT
DNA polymerase III delta prime subunit protein {ECO:0000313|EMBL:KFE64884.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
DNA polymerase III subunit delta'
13_1_40cm_3_scaffold_8481_29
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24119..25411
DNA (1293bp) protein (431aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III delta subunit n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R365_9DELT
DNA polymerase III delta subunit {ECO:0000313|EMBL:EPX63333.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" s
Displaying 29 items

View Taxonomy