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13_1_40cm_3_scaffold_1249

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1249_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..815
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629FB
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG88245.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1249_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1020..2291)
DNA (1272bp) protein (424aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Nitrospirae_64_22_curated
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase id=3779771 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_1249_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(2297..2623)
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJR0_9BACT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=458033 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
13_1_40cm_3_scaffold_1249_4
unknown

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comp(2785..2970)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_3_scaffold_1249_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3026..4315
DNA (1290bp) protein (430aa)
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:CDM67112.1}; EC=2.3.1.179 {ECO:0000313|EMBL:CDM67112.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367F0FE
beta-ketoacyl synthase
13_1_40cm_3_scaffold_1249_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4308..4955
DNA (648bp) protein (216aa)
Putative uncharacterized protein id=4337268 bin=GWC2_Ignavibacteria_56_12 species=Marinilabilia sp. AK2 genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
methylase
13_1_40cm_3_scaffold_1249_7
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4952..5908
DNA (957bp) protein (319aa)
geranylgeranyl reductase id=14632280 bin=bin9_gal15 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:ADP84259.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_40cm_3_scaffold_1249_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5955..7067
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037F75F0
Glycosyl transferase {ECO:0000313|EMBL:CDM66968.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycosyltransferase
13_1_40cm_3_scaffold_1249_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7071..7925
DNA (855bp) protein (285aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629A3 rbh
13_1_40cm_3_scaffold_1249_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7879..8778
DNA (900bp) protein (300aa)
pantothenate synthetase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003714796 rbh
pantothenate synthetase
13_1_40cm_3_scaffold_1249_11
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

8797..9609
DNA (813bp) protein (271aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=20453
Putative uncharacterized protein n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWG4_SULAA
hypothetical protein
13_1_40cm_3_scaffold_1249_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

9613..10098
DNA (486bp) protein (162aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
TPR repeat-containing protein id=2999375 bin=GWA2_OP3_52_12 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
13_1_40cm_3_scaffold_1249_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10233..12899
DNA (2667bp) protein (889aa)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor (EC:2.1.1.80 3.1.1.61)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor {ECO:0000313|EMBL:BAN34776.1}; EC=2.1.1.80 {ECO:0000313|EMBL:BAN34776.1};; EC=3.1.1.61 {ECO:0000313|EMBL:BAN34776.1};; TaxID=1163617
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFT6_9PROT rbh
13_1_40cm_3_scaffold_1249_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12896..14488
DNA (1593bp) protein (531aa)
putative sensor histidine kinase (EC:2.7.13.3) Tax=RBG_16_Deltaproteobacteria_54_11_curated
histidine kinase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039D7A0C
signal transduction histidine kinase
13_1_40cm_3_scaffold_1249_15
RLO_PLX_64_10, Bacteria

Not on your lists

14485..15117
DNA (633bp) protein (211aa)
Response regulator with a HTH DNA-binding domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRF9_SYNAS
response regulator Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
response regulator
13_1_40cm_3_scaffold_1249_16
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15326..16390
DNA (1065bp) protein (355aa)
Two-component hybrid sensor and regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCL2_9DELT
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EPX59074.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystoba
two-component sensor histidine kinase
13_1_40cm_3_scaffold_1249_17
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16484..19228
DNA (2745bp) protein (915aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1) Tax=GWA2_Ignavibacteria_54_16_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent id=4939284 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
13_1_40cm_3_scaffold_1249_18
S_OP1_64_32, KB1, Bacteria

Not on your lists

19340..20434
DNA (1095bp) protein (365aa)
Aspartokinase n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GBI1_SPITZ
Aspartokinase Tax=S_OP1_64_32
aspartate kinase
Displaying 18 items

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