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13_1_40cm_3_scaffold_1375

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1375_1
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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3..1079
DNA (1077bp) protein (359aa)
Amidohydrolase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUZ7_ACEAZ
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADL12056.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATC
13_1_40cm_3_scaffold_1375_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(1160..1753)
DNA (594bp) protein (198aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXD5_DESAC
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculu
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_1_40cm_3_scaffold_1375_3
unknown

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comp(1769..2416)
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_3_scaffold_1375_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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2425..3117
DNA (693bp) protein (231aa)
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU7_9BACT
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE
13_1_40cm_3_scaffold_1375_5

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comp(3191..4678)
DNA (1488bp) protein (496aa)
Glycine decarboxylase (Subunit 2) (Glycine cleavage system protein P) {ECO:0000313|EMBL:CBI08960.1}; EC=1.4.4.2 {ECO:0000313|EMBL:CBI08960.1};; TaxID=410659 species="unclassified sequences; metagenome
Glycine decarboxylase (Subunit 2) (Glycine cleavage system protein P) n=1 Tax=mine drainage metagenome RepID=E6QNY9_9ZZZZ
glycine dehydrogenase subunit 2
13_1_40cm_3_scaffold_1375_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4675..6033)
DNA (1359bp) protein (453aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000255|HAMAP-Rule:MF_00712}; EC=1.4.4.2 {ECO:0000255|HAMAP-Rule:MF_00712};; Glycine cleavage system P-protein subunit 1 {ECO:0000255|HA
Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GCSPA_KORVE
glycine dehydrogenase subunit 1
13_1_40cm_3_scaffold_1375_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6047..6430)
DNA (384bp) protein (128aa)
Glycine cleavage system H protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=GCSH_RUBXD
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
glycine cleavage system protein H
13_1_40cm_3_scaffold_1375_8
CSP1_5_NC10, NC10, Bacteria

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comp(6509..7579)
DNA (1071bp) protein (357aa)
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10) id=14430447 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10) Tax=CSP1_5_NC10
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10)
13_1_40cm_3_scaffold_1375_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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7656..9476
DNA (1821bp) protein (607aa)
Long-chain acyl-CoA synthetase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein id=8266720 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
AMP-dependent synthetase and ligase
13_1_40cm_3_scaffold_1375_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9649..11361
DNA (1713bp) protein (571aa)
M38 (Beta-aspartyl dipeptidase) family protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NW59_9DELT
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
M38 (Beta-aspartyl dipeptidase) family protein
13_1_40cm_3_scaffold_1375_11
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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11381..12340
DNA (960bp) protein (320aa)
Glyoxylate reductase / Hydroxypyruvate reductase {ECO:0000313|EMBL:CCU79837.1}; EC=1.1.1.26 {ECO:0000313|EMBL:CCU79837.1};; EC=1.1.1.81 {ECO:0000313|EMBL:CCU79837.1};; TaxID=1293054 species="Bacteria;
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
Glyoxylate reductase / Hydroxypyruvate reductase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1P3_9FIRM rbh
13_1_40cm_3_scaffold_1375_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

12404..13330
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LII8_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11886.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_1_40cm_3_scaffold_1375_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13337..14740
DNA (1404bp) protein (468aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinom
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6D1_ACIC5
mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
13_1_40cm_3_scaffold_1375_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14737..15144
DNA (408bp) protein (136aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM66391.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_3_scaffold_1375_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15151..16341
DNA (1191bp) protein (397aa)
threonyl/alanyl tRNA synthetase SAD; K07050 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
threonyl/alanyl tRNA synthetase, SAD; K07050 id=14630766 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
alaS2; alanyl-tRNA synthetase
13_1_40cm_3_scaffold_1375_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16530..17600)
DNA (1071bp) protein (357aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV1_SOLUE
NHL repeat-containing protein
NHL repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_1375_17
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

17853..18173
DNA (321bp) protein (107aa)
fumA; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha; K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=RBG_16_Caldithrix_48_16_curated
fumarase (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit id=3536888 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
13_1_40cm_3_scaffold_1375_18
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

18151..19332
DNA (1182bp) protein (394aa)
fumA; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha; K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=RBG_16_Caldithrix_48_16_curated
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WU20_KYRT2
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
13_1_40cm_3_scaffold_1375_19
unknown

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comp(19329..19784)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_3_scaffold_1375_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(19930..20457)
DNA (528bp) protein (176aa)
ThiJ/PfpI domain protein; K05520 protease I [EC:3.2.-.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
protease I (EC:3.2.-.-)
ThiJ/PfpI domain-containing protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YXF0_9EURY
13_1_40cm_3_scaffold_1375_21
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

20478..21236
DNA (759bp) protein (253aa)
methionine aminopeptidase (EC:3.4.11.18) Tax=CG_Elusi_04
methionine aminopeptidase (EC:3.4.11.18)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000379BEE2
13_1_40cm_3_scaffold_1375_22
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(21199..22077)
DNA (879bp) protein (293aa)
von Willebrand factor, type A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T76_SOLUE
von Willebrand factor A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
von Willebrand factor A
Displaying 22 items

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