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13_1_40cm_3_scaffold_11629

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_11629_1
unknown

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2..502
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_3_scaffold_11629_2
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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507..3083
DNA (2577bp) protein (859aa)
DNA ligase D, ATP-dependent n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E922_GEOBB rbh
ligD; DNA ligase D
DNA ligase D, ATP-dependent {ECO:0000313|EMBL:ACH37159.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemid
13_1_40cm_3_scaffold_11629_3
R_RIF_OD1_12_45_13b, RIF-OD1-12, Parcubacteria, Bacteria

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3282..4943
DNA (1662bp) protein (554aa)
thymidylate synthase complementing protein ThyX Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_13b_curated
chl:Chy400_0381 thymidylate synthase complementing protein ThyX id=85827 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
thymidylate synthase complementing protein ThyX
13_1_40cm_3_scaffold_11629_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5068..5343)
DNA (276bp) protein (92aa)
Tetratricopeptide repeat protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQV4_SOLCM
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AFD06975.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea
13_1_40cm_3_scaffold_11629_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5309..6229)
DNA (921bp) protein (307aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:CDM66699.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=14426698 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
periplasmic binding protein
13_1_40cm_3_scaffold_11629_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(6226..6690)
DNA (465bp) protein (155aa)
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RBG_16_Euryarchaeota_68_12_curated
ptpS; putative 6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
Putative 6-pyruvoyl-tetrahydropterin synthase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7U3_UNCMA
13_1_40cm_3_scaffold_11629_7
unknown

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comp(6723..6851)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_3_scaffold_11629_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7108..9075)
DNA (1968bp) protein (656aa)
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:CDM66448.1}; EC=4.2.1.33 {ECO:0000313|EMBL:CDM66448.1};; EC=4.2.1.35 {ECO:0000313|EMBL:CDM66448.1};; TaxID=454194 species="Bacteria; Acido
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC07_SORCE
hypothetical protein
13_1_40cm_3_scaffold_11629_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(9094..9342)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037CFF76
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_3_scaffold_11629_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(9323..10828)
DNA (1506bp) protein (502aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RBG_16_Acidobacteria_70_10_curated
Probable cytosol aminopeptidase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3K5_THEA1
peptidase M17 leucyl aminopeptidase domain protein
13_1_40cm_3_scaffold_11629_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(11116..11346)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMZ3_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_3_scaffold_11629_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(11437..11733)
DNA (297bp) protein (99aa)
endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
endonuclease III n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4CDBB
endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
Displaying 12 items

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