ggKbase home page

13_1_40cm_3_scaffold_1706

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1706_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1..561
DNA (561bp) protein (187aa)
putative amidase C869.01-like Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Uncharacterized protein id=4839900 bin=GWC2_Syntrophus__56_31 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_3_scaffold_1706_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

619..1107
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B16_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81750.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_3_scaffold_1706_3
unknown

Not on your lists

comp(1451..1951)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_3_scaffold_1706_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2312..3166
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPK2_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
NHL repeat-containing protein
13_1_40cm_3_scaffold_1706_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3208..3558)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJF1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42999.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_1706_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3558..4433)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJF0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43000.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_40cm_3_scaffold_1706_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4532..6019)
DNA (1488bp) protein (496aa)
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] id=14628051 bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=CSP1_6_Rokubacteria
methylenetetrahydrofolate reductase
13_1_40cm_3_scaffold_1706_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6021..7022)
DNA (1002bp) protein (334aa)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14628052 bin=bin7_NC10_sister species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
13_1_40cm_3_scaffold_1706_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7029..8651)
DNA (1623bp) protein (541aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14628053 bin=bin7_NC10_sister species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_1706_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8914..10476
DNA (1563bp) protein (521aa)
Nitrogenase (Molybdenum-iron)-specific transcriptional regulator NifA n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PL86_9DELT
Nif-specific regulatory protein {ECO:0000313|EMBL:CDM64027.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Nif-specific regulatory protein
13_1_40cm_3_scaffold_1706_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10517..10786)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377E898
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92268.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1706_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10797..12479)
DNA (1683bp) protein (561aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV1_KORVE
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG92267.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
Displaying 12 items

View Taxonomy