ggKbase home page

13_1_40cm_3_scaffold_6280

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6280_1
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC57_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29728.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_1_40cm_3_scaffold_6280_2
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

comp(298..1485)
DNA (1188bp) protein (396aa)
rfaG; glycosyltransferase Tax=CG_Omnitr_04
Glycosyltransferase id=4325557 bin=GWC2_OP3-like_45_7 species=unknown genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
rfaG; glycosyltransferase
13_1_40cm_3_scaffold_6280_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1701..2960)
DNA (1260bp) protein (420aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Glutamate--tRNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI5_9BACT
gltX; glutamyl-tRNA ligase
13_1_40cm_3_scaffold_6280_4
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(2957..4225)
DNA (1269bp) protein (423aa)
TPR-repeat protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WKT0_METH6
HEAT repeat-containing PBS lyase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
TPR-repeat protein
13_1_40cm_3_scaffold_6280_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4207..4989)
DNA (783bp) protein (261aa)
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDM66690.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylalip
Cation efflux family protein id=4329427 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cation diffusion facilitator family transporter
13_1_40cm_3_scaffold_6280_6
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

5139..6284
DNA (1146bp) protein (382aa)
Butyryl-CoA dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIT0_9BACT
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:BAL56066.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
butyryl-CoA dehydrogenase
13_1_40cm_3_scaffold_6280_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6285..7256
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024I7_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83589.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_3_scaffold_6280_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7482..8618
DNA (1137bp) protein (379aa)
Putative membrane protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF56_CHLTF
Uncharacterized membrane protein {ECO:0000313|EMBL:CDM65786.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_3_scaffold_6280_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8653..11061
DNA (2409bp) protein (803aa)
RNA binding S1 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R15_SOLUE rbh
RNA-binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:ABJ87905.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_3_scaffold_6280_10
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

11098..12315
DNA (1218bp) protein (406aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS4_KORVE
ABC efflux pump, inner membrane subunit Tax=RBG_16_Zixibacteria_43_9_curated
efflux ABC transporter inner membrane protein
13_1_40cm_3_scaffold_6280_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12308..13555
DNA (1248bp) protein (416aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS3_KORVE
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF39727.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
Displaying 11 items

View Taxonomy