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13_1_40cm_3_scaffold_6412

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6412_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3..1784
DNA (1782bp) protein (594aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZB0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85005.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_3_scaffold_6412_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1810..3816
DNA (2007bp) protein (669aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZI5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84930.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_3_scaffold_6412_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3819..4721
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZI5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84930.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_3_scaffold_6412_4
unknown

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comp(4840..5682)
DNA (843bp) protein (281aa)

This feature has no annotations

13_1_40cm_3_scaffold_6412_5
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(5691..6269)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A6M1_9ACTN
sigR; RNA polymerase ECF subfamily sigma factor Tax=RBG_16_Actinobacteria_67_15_curated
sigR; RNA polymerase ECF subfamily sigma factor
13_1_40cm_3_scaffold_6412_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(6289..8046)
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360B425
TPR repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_3_scaffold_6412_7
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8539..9759
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JNS9_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA48884.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
13_1_40cm_3_scaffold_6412_8
unknown

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comp(9833..10573)
DNA (741bp) protein (247aa)

This feature has no annotations

13_1_40cm_3_scaffold_6412_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

10592..11959
DNA (1368bp) protein (456aa)
L-seryl-tRNA(Sec) selenium transferase; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHX9_KORVE
L-seryl-tRNA(Sec) selenium transferase
13_1_40cm_3_scaffold_6412_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(11996..12559)
DNA (564bp) protein (188aa)
translation elongation factor P (EF-P); K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Elongation factor P id=2233824 bin=GWB2_Proteobacteria_55_19 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
translation elongation factor P (EF-P)
13_1_40cm_3_scaffold_6412_11
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12771..13307
DNA (537bp) protein (179aa)
FAD-binding molybdopterin dehydrogenase; K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] Tax=RBG_13_Deltaproteobacteria_53_10_curated
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F6H7_9DELT
FAD-binding molybdopterin dehydrogenase
13_1_40cm_3_scaffold_6412_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(13319..14107)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003687988
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_6412_13
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14140..16380
DNA (2241bp) protein (747aa)
Peptidase S53 propeptide n=1 Tax=Geobacter sp. (strain M18) RepID=E8WKD6_GEOS8
peptidase S53 propeptide Tax=GWC2_Geobacteraceae_58_44_curated
peptidase S53 propeptide
13_1_40cm_3_scaffold_6412_14
unknown

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16355..16693
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_6412_15
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16706..16954
DNA (249bp) protein (83aa)
Putative regulatory protein, FmdB family {ECO:0000313|EMBL:EXI65376.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibac
13_1_40cm_3_scaffold_6412_16
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17201..18193
DNA (993bp) protein (331aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Pusillimonas noertemannii RepID=UPI000368FEC7
4,5-dihydroxyphthalate decarboxylase
13_1_40cm_3_scaffold_6412_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(18278..19162)
DNA (885bp) protein (295aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISS3_KORVE id=5223684 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_1_40cm_3_scaffold_6412_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

19260..19601
DNA (342bp) protein (114aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029R9_SOLUE
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:ABJ82207.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so
13_1_40cm_3_scaffold_6412_19
unknown

Not on your lists

19804..20025
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_3_scaffold_6412_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20062..20724
DNA (663bp) protein (221aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 20 items

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