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13_1_40cm_3_scaffold_636

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_636_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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2..1075
DNA (1074bp) protein (358aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase id=14427769 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
3-hydroxybutyryl-CoA dehydrogenase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_3_scaffold_636_2

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comp(1056..1547)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003645A56
Nucleotide-binding Rossmann fold-containing protein {ECO:0000313|EMBL:AIF22976.1}; TaxID=1456378 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT
TIGR00725 family protein
13_1_40cm_3_scaffold_636_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1663..2994)
DNA (1332bp) protein (444aa)
hypothetical protein id=14427777 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_3_scaffold_636_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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3127..4434
DNA (1308bp) protein (436aa)
elongation factor 1-alpha (EC:2.7.7.4)
Putative elongation factor 1-alpha n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATN5_9ARCH rbh
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
13_1_40cm_3_scaffold_636_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4443..4751
DNA (309bp) protein (103aa)
30S ribosomal protein S10P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT24_9ARCH
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archae
rpsJ; ribosomal protein S10
13_1_40cm_3_scaffold_636_6
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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4792..4989
DNA (198bp) protein (66aa)
RNA polymerase Rbp10 n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KJQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06650.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
RNA polymerase Rbp10
13_1_40cm_3_scaffold_636_7

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comp(5190..5600)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon W4-93a RepID=H9BWV5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKN03567.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_636_8
unknown

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comp(5672..5782)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_3_scaffold_636_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(5876..7270)
DNA (1395bp) protein (465aa)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:CDI05587.1}; EC=2.3.3.10 {ECO:0000313|EMBL:CDI05587.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Tha
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASG6_9ARCH rbh
hydroxymethylglutaryl-CoA synthase
13_1_40cm_3_scaffold_636_10
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7451..8122)
DNA (672bp) protein (224aa)
DSBA oxidoreductase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWM9_9ARCH
DSBA oxidoreductase {ECO:0000313|EMBL:EGP93681.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum
DSBA oxidoreductase
13_1_40cm_3_scaffold_636_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8226..9275
DNA (1050bp) protein (350aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] id=14428223 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] Tax=CSP1_1_Thaumarchaeota
putative glyceraldehyde-3-phosphate dehydrogenase, type II
13_1_40cm_3_scaffold_636_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9330..10229
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMU7_NITGG
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AIC15299.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_3_scaffold_636_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(10226..11557)
DNA (1332bp) protein (444aa)
Threonine synthase {ECO:0000313|EMBL:CDI05593.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CDI05593.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archa
thrC; Threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT07_9ARCH rbh
13_1_40cm_3_scaffold_636_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(11825..12166)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E599_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA04656.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_3_scaffold_636_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12311..13165
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMU3_NITGG
conserved protein of DIM6/NTAB family
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:AIF83513.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="C
13_1_40cm_3_scaffold_636_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13162..13521)
DNA (360bp) protein (120aa)
hypothetical protein id=14428228 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_3_scaffold_636_17
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(13545..13838)
DNA (294bp) protein (98aa)
resolvase, Holliday junction-type id=14428229 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Uncharacterized protein {ECO:0000313|EMBL:CDI05600.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_3_scaffold_636_18
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13807..14079)
DNA (273bp) protein (91aa)
Resolvase, Holliday junction-type n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWP1_9ARCH
Resolvase, Holliday junction-type {ECO:0000313|EMBL:EGP93693.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus N
resolvase, Holliday junction-type
13_1_40cm_3_scaffold_636_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14222..14554
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAK5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58351.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_636_20
unknown

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comp(14592..15083)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_3_scaffold_636_21
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15205..16008)
DNA (804bp) protein (268aa)
Sensor protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX49_9ARCH
Sensor protein {ECO:0000313|EMBL:EGP93851.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum kore
hypothetical protein
13_1_40cm_3_scaffold_636_22

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comp(16015..16629)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCU0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM73810.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_636_23
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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16731..18224
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBM5_9ARCH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82869.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_3_scaffold_636_24
unknown

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18342..18593
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_3_scaffold_636_25
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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18678..19535
DNA (858bp) protein (286aa)
Transcriptional regulator TrmB n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEH4_9ARCH
transcriptional regulator TrmB
Transcriptional regulator TrmB {ECO:0000313|EMBL:AFS82756.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus s
13_1_40cm_3_scaffold_636_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

19556..19843
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATA9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05887.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_3_scaffold_636_27
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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19847..20647
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT37_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05886.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
conserved membrane protein of unknown function
13_1_40cm_3_scaffold_636_28

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comp(20657..20980)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000366FDDF
Uncharacterized protein {ECO:0000313|EMBL:AIF11642.1}; TaxID=1456181 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_53_C08.;"
hypothetical protein
13_1_40cm_3_scaffold_636_29
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(20977..22086)
DNA (1110bp) protein (370aa)
acetyl-/propanoyl CoA C-acetyltransferase (EC:2.3.1.176)
propanoyl-CoA C-acyltransferase id=14428231 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
propanoyl-CoA C-acyltransferase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_3_scaffold_636_30
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22083..23063)
DNA (981bp) protein (327aa)
luciferase family protein id=14428232 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
luciferase family protein Tax=CSP1_1_Thaumarchaeota
Luciferase family protein
Displaying items 1-30 of 35 in total

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