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13_1_40cm_3_scaffold_1639

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1639_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(3..410)
DNA (408bp) protein (136aa)
Uncharacterized HTH-type transcriptional regulator PH0140 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=REG3_PYRHO
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_16_Thaumarchaeota_49_8_curated
AsnC family transcriptional regulator
13_1_40cm_3_scaffold_1639_2
unknown

Not on your lists

comp(726..1961)
DNA (1236bp) protein (412aa)

This feature has no annotations

13_1_40cm_3_scaffold_1639_3
Macaca mulatta, Macaca, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(1978..3357)
DNA (1380bp) protein (460aa)
Basic salivary proline-rich protein 2 (Fragment) n=1 Tax=Macaca mulatta RepID=G7N674_MACMU
Basic salivary proline-rich protein 2 {ECO:0000313|EMBL:EHH20518.1}; Flags: Fragment;; TaxID=9544 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarcho
forkhead-associated protein
13_1_40cm_3_scaffold_1639_4
unknown

Not on your lists

comp(3357..3704)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_1639_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

3903..4895
DNA (993bp) protein (331aa)
DNA repair and recombination protein RadA n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU1_9CREN
DNA recombination and repair protein, RecA-like protein Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA repair protein RadA
13_1_40cm_3_scaffold_1639_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

4858..5331
DNA (474bp) protein (158aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1639_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5309..5536)
DNA (228bp) protein (76aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1639_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

5769..6344
DNA (576bp) protein (192aa)
Putative signal transduction protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
signal-transduction protein Tax=RBG_16_Archaea_50_20_curated
CBS-domain-containing protein
13_1_40cm_3_scaffold_1639_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

6322..7680
DNA (1359bp) protein (453aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2Q9H6_METFO
13_1_40cm_3_scaffold_1639_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

7677..8153
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DP39_STAMF
hypothetical protein; K09122 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_3_scaffold_1639_11
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

8166..8783
DNA (618bp) protein (206aa)
Protein Tpen_0748 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=Y748_THEPD
AMMECR1 domain-containing protein
Protein Tpen_0748 {ECO:0000255|HAMAP-Rule:MF_00645}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk
13_1_40cm_3_scaffold_1639_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

8793..9974
DNA (1182bp) protein (394aa)
Glycosyltransferase 28 domain protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6Y7_KORCO
glycosyltransferase Tax=RBG_16_Archaea_50_20_curated
glycosyltransferase family 28 protein
13_1_40cm_3_scaffold_1639_13
unknown

Not on your lists

10052..10507
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_3_scaffold_1639_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

10649..11431
DNA (783bp) protein (261aa)
tRNA(1-methyladenosine) methyltransferase-like methyltransferase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T838_9ARCH
tRNA methyltransferase complex GCD14 subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
type 11 methyltransferase
13_1_40cm_3_scaffold_1639_15
unknown

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11428..11727
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_3_scaffold_1639_16
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

11804..13237
DNA (1434bp) protein (478aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RBG_16_Bathyarchaeota_48_13_curated
Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468U2_METBF
13_1_40cm_3_scaffold_1639_17
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

13593..14291
DNA (699bp) protein (233aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Spraguea lophii (strain 42_110) RepID=S7W929_SPRLO
glycosyltransferase group 2 Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
family 2 glycosyl transferase
13_1_40cm_3_scaffold_1639_18
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

Not on your lists

comp(14288..15055)
DNA (768bp) protein (256aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeot
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
hypothetical protein
13_1_40cm_3_scaffold_1639_19
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

15107..15682
DNA (576bp) protein (192aa)
ArsR family transcriptional regulator n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B3B52B
UbiE/COQ5 methyltransferase Tax=RBG_16_Bathyarchaeota_48_13_curated
biotin synthesis protein BioC
13_1_40cm_3_scaffold_1639_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16273..16860)
DNA (588bp) protein (196aa)
pyridoxin-like ECF transporter substrate-specific component Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein id=24429345 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_3_scaffold_1639_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16864..18417)
DNA (1554bp) protein (518aa)
pyrG; CTP synthetase (EC:6.3.4.2) Tax=RBG_13_Bathyarchaeota_38_9_curated
CTP synthase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFT1_PYRYC
CTP synthetase
13_1_40cm_3_scaffold_1639_22
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(18550..19197)
DNA (648bp) protein (216aa)
transaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcac
Probable transaldolase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTU6_METIM
13_1_40cm_3_scaffold_1639_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19258..20199)
DNA (942bp) protein (314aa)
tktB; transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, C-terminal subunit {ECO:0000313|EMBL:AFU60392.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AFU60392.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrosos
Transketolase, C-terminal subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML5_NITGG
13_1_40cm_3_scaffold_1639_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20199..20885)
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium ultunense Esp RepID=M1ZEX2_9CLOT
rpe; ribulose-phosphate 3-epimerase
13_1_40cm_3_scaffold_1639_25
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20882..21709)
DNA (828bp) protein (276aa)
Transketolase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XCS1_THEPJ
transketolase
Transketolase domain protein {ECO:0000313|EMBL:ADG83597.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR)
13_1_40cm_3_scaffold_1639_26
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(21712..22737)
DNA (1026bp) protein (342aa)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE id=1871886 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PfkB domain-containing protein
Tax=BJP_IG2158_Nitrospirales_45_240
13_1_40cm_3_scaffold_1639_27
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

23080..24315
DNA (1236bp) protein (412aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB1_NITGG
acyl-CoA dehydrogenase Tax=RBG_16_Archaea_50_20_curated
putative acyl-CoA dehydrogenase
13_1_40cm_3_scaffold_1639_28
unknown

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24925..25206
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_3_scaffold_1639_29
unknown

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25241..25750
DNA (510bp) protein (170aa)

This feature has no annotations

13_1_40cm_3_scaffold_1639_30
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

25826..27106
DNA (1281bp) protein (427aa)
FixC; dehydrogenases; K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] Tax=RBG_16_Euryarchaeota_68_13_curated
Dehydrogenases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1D5_PELTS rbh
FixC; dehydrogenases
Displaying items 1-30 of 31 in total

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