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13_1_40cm_3_scaffold_1048

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1048_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2..1009
DNA (1008bp) protein (336aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG62_9BACT rbh
13_1_40cm_3_scaffold_1048_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1024..1551
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG63_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1048_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1548..2729
DNA (1182bp) protein (394aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG64_9BACT
13_1_40cm_3_scaffold_1048_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2722..3690
DNA (969bp) protein (323aa)
putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative signal peptide peptidase SppA (EC:3.4.21.-)
Putative Signal peptide peptidase SppA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG65_9BACT rbh
13_1_40cm_3_scaffold_1048_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3751..4707
DNA (957bp) protein (319aa)
Putative Peptidase M48, Ste24p n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG66_9BACT
putative peptidase M48, Ste24p
Putative Peptidase M48, Ste24p {ECO:0000313|EMBL:CBK42253.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_1048_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4720..7971
DNA (3252bp) protein (1084aa)
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116, ECO:0000313|EMBL:CBK42254.1};; TaxID=330214 species="Bacteria; Nitrospi
Carbamoyl-phosphate synthase large chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG67_9BACT rbh
13_1_40cm_3_scaffold_1048_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8006..8482
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG68_9BACT
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=330214 species="Bacteria
13_1_40cm_3_scaffold_1048_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8587..9387
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG69_9BACT rbh
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1048_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9633..11639)
DNA (2007bp) protein (669aa)
glycosyl hydrolase, glucoamylase (EC:3.2.1.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
glycosyl hydrolase, glucoamylase (EC:3.2.1.3)
Similar to glucoamylase id=4827255 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
13_1_40cm_3_scaffold_1048_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11709..13070)
DNA (1362bp) protein (454aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_cu
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG72_9BACT
13_1_40cm_3_scaffold_1048_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13326..14993
DNA (1668bp) protein (556aa)
Elongation factor 4 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG73_9BACT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lepA; GTP-binding protein LepA
13_1_40cm_3_scaffold_1048_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

14996..15781
DNA (786bp) protein (262aa)
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG74_9BACT rbh
13_1_40cm_3_scaffold_1048_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15751..16815
DNA (1065bp) protein (355aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG75_9BACT
13_1_40cm_3_scaffold_1048_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16808..17608
DNA (801bp) protein (267aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG76_9BACT
13_1_40cm_3_scaffold_1048_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17609..19213
DNA (1605bp) protein (535aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG77_9BACT
13_1_40cm_3_scaffold_1048_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

19249..20088
DNA (840bp) protein (280aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG78_9BACT
13_1_40cm_3_scaffold_1048_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20085..21044
DNA (960bp) protein (320aa)
kdsD; arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose-5-phosphate isomerase {ECO:0000313|EMBL:CBK42266.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CBK42266.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" sou
Arabinose-5-phosphate isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG79_9BACT
13_1_40cm_3_scaffold_1048_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

21083..21703
DNA (621bp) protein (207aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Ni
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG80_9BACT
13_1_40cm_3_scaffold_1048_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

21731..22330
DNA (600bp) protein (200aa)
plsY; hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG81_9BACT
plsY; hypothetical protein
13_1_40cm_3_scaffold_1048_20
unknown

Not on your lists

comp(22355..22936)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_3_scaffold_1048_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

23159..23785
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG82_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1048_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

23821..24150
DNA (330bp) protein (110aa)
degP3; serine protease do (EC:3.4.21.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
degP3; serine protease do (EC:3.4.21.-)
Serine protease do n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG83_9BACT
Displaying 22 items

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