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13_1_40cm_3_scaffold_1977

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1977_1
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(1..807)
DNA (807bp) protein (269aa)
porA; pyruvate:ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1); K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
porA; pyruvate:ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase alpha subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBX4_9BACT
13_1_40cm_3_scaffold_1977_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(810..1469)
DNA (660bp) protein (220aa)
porD; pyruvate:ferredoxin oxidoreductase subunit delta (EC:1.2.7.1)
Pyruvate:ferredoxin oxidoreductase delta subunit {ECO:0000313|EMBL:CBK40734.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CBK40734.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; N
Pyruvate:ferredoxin oxidoreductase delta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBX5_9BACT
13_1_40cm_3_scaffold_1977_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1781..3046)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Acetonema longum DSM 6540 RepID=F7NJ28_9FIRM
TPR-repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
TPR-repeat-containing protein
13_1_40cm_3_scaffold_1977_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3176..3532)
DNA (357bp) protein (119aa)
YciI-like protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE04
hypothetical protein; K09780 hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1977_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3474..3893)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE05
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1977_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4388..5635
DNA (1248bp) protein (416aa)
rho; transcription termination factor Rho (EC:3.6.1.-)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBK40737.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M
Transcription termination factor Rho n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBX8_9BACT
13_1_40cm_3_scaffold_1977_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


5724..5930
DNA (207bp) protein (69aa)
50S ribosomal protein L31 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBX9_9BACT
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpmE; 50S ribosomal protein L31
13_1_40cm_3_scaffold_1977_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6008..7108
DNA (1101bp) protein (367aa)
Peptide chain release factor 1 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY0_9BACT rbh
prfA; peptide chain release factor RF-1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
prfA; peptide chain release factor RF-1
13_1_40cm_3_scaffold_1977_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7092..7982
DNA (891bp) protein (297aa)
hemK; protein-(glutamine-N5) methyltransferase (EC:2.1.1.-); K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemK; protein-(glutamine-N5) methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY1_9BACT
13_1_40cm_3_scaffold_1977_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8073..9359
DNA (1287bp) protein (429aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY2_9BACT
13_1_40cm_3_scaffold_1977_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9356..9850
DNA (495bp) protein (165aa)
hisG; ATP-phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY3_9BACT
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
13_1_40cm_3_scaffold_1977_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10036..10716
DNA (681bp) protein (227aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY4_9BACT
13_1_40cm_3_scaffold_1977_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10713..11282
DNA (570bp) protein (190aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY4_9BACT
13_1_40cm_3_scaffold_1977_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11279..11881
DNA (603bp) protein (201aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY5_9BACT
13_1_40cm_3_scaffold_1977_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11896..12528
DNA (633bp) protein (211aa)
hisH; imidazole glycerol phosphate synthase glutamine amidotransferase subunit (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hisH; imidazole glycerol phosphate synthase glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY6_9BACT rbh
13_1_40cm_3_scaffold_1977_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12536..13195
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_1977_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

13262..13984
DNA (723bp) protein (241aa)
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RBG_19FT_C
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBY8_9BACT rbh
13_1_40cm_3_scaffold_1977_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14121..14981
DNA (861bp) protein (287aa)
hisF; imidazole glycerol phosphate synthase cyclase subunit (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YZT2_9BACT
imidazole glycerol phosphate synthase
13_1_40cm_3_scaffold_1977_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15877..16146
DNA (270bp) protein (90aa)
Purine nucleoside phosphoramidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ1_9BACT
hinT; purine nucleoside phosphoramidase; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hinT; purine nucleoside phosphoramidase
13_1_40cm_3_scaffold_1977_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16444..16617
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE23_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41482.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 20 items

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