ggKbase home page

13_1_40cm_3_scaffold_3874

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3874_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2..1993
DNA (1992bp) protein (664aa)
UvrABC system protein B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN6_9BACT rbh
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
uvrB; excinuclease ABC subunit B
13_1_40cm_3_scaffold_3874_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1987..2523)
DNA (537bp) protein (179aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_40cm_3_scaffold_3874_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


2762..4114
DNA (1353bp) protein (451aa)
Signal recognition particle protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN3_9BACT
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ffh; signal recognition particle protein
13_1_40cm_3_scaffold_3874_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


4231..4515
DNA (285bp) protein (95aa)
30S ribosomal protein S16 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN2_9BACT
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBK42769.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus N
13_1_40cm_3_scaffold_3874_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4521..5066
DNA (546bp) protein (182aa)
Ribosome maturation factor RimM n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN1_9BACT
rimM; ribosome maturation factor rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Cand
13_1_40cm_3_scaffold_3874_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5050..5844
DNA (795bp) protein (265aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN0_9BACT
13_1_40cm_3_scaffold_3874_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


5849..6292
DNA (444bp) protein (148aa)
50S ribosomal protein L19 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM9_9BACT
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rplS; 50S ribosomal protein L19
13_1_40cm_3_scaffold_3874_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6364..6984
DNA (621bp) protein (207aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM8_9BACT
13_1_40cm_3_scaffold_3874_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6985..7371
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B193
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_3874_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7639..8307
DNA (669bp) protein (223aa)
ftsE; cell division protein FtsE (EC:3.6.3.-); K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsE; cell division protein FtsE (EC:3.6.3.-)
Cell division protein FtsE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM6_9BACT
13_1_40cm_3_scaffold_3874_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8304..9203
DNA (900bp) protein (300aa)
Cell division protein FtsX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM5_9BACT
putative cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cell division protein FtsX
13_1_40cm_3_scaffold_3874_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9200..10075
DNA (876bp) protein (292aa)
Putative Murein hydrolase EnvC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM4_9BACT
putative murein hydrolase EnvC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative murein hydrolase EnvC
Displaying 12 items

View Taxonomy