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13_1_40cm_3_scaffold_6071

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6071_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2..700)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC9_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_6071_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

920..1522
DNA (603bp) protein (201aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC8_9BACT
13_1_40cm_3_scaffold_6071_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1675..2541
DNA (867bp) protein (289aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC7_9BACT
13_1_40cm_3_scaffold_6071_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2617..3801
DNA (1185bp) protein (395aa)
Probable tRNA sulfurtransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC5_9BACT rbh
putative thiamine biosynthesis protein ThiI; K03151 thiamine biosynthesis protein ThiI Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative thiamine biosynthesis protein ThiI
13_1_40cm_3_scaffold_6071_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3795..4391)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40883.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_6071_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4518..4682
DNA (165bp) protein (55aa)
Putative Regulatory protein, FmdB family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7V4_9BACT
putative FmdB family regulatory protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative FmdB family regulatory protein
13_1_40cm_3_scaffold_6071_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4804..5916)
DNA (1113bp) protein (371aa)
DGQHR domain protein n=1 Tax=uncultured prokaryote RepID=H5SKN6_9ZZZZ
DGQHR domain protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_3_scaffold_6071_8
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5997..7703)
DNA (1707bp) protein (569aa)
PHP domain protein n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7ITH9_THEET
PHP domain protein {ECO:0000313|EMBL:EEU61954.1}; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobac
phosphotransferase domain-containing protein
13_1_40cm_3_scaffold_6071_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7874..8857
DNA (984bp) protein (328aa)
hypothetical protein id=14627729 bin=bin7_NC10_sister species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_3_scaffold_6071_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

8889..9983
DNA (1095bp) protein (365aa)
putative peptidase id=14428912 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
putative peptidase Tax=CSP1_5_NC10
putative peptidase
13_1_40cm_3_scaffold_6071_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10026..10988
DNA (963bp) protein (321aa)
Epoxyqueuosine reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC1_9BACT rbh
yjeS; putative 4Fe-4S ferredoxin Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
yjeS; putative 4Fe-4S ferredoxin
13_1_40cm_3_scaffold_6071_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11700..12731
DNA (1032bp) protein (344aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ32_9BACT
13_1_40cm_3_scaffold_6071_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12896..14275
DNA (1380bp) protein (460aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC0_9BACT rbh
sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CBK40879.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira
13_1_40cm_3_scaffold_6071_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14335..16230
DNA (1896bp) protein (632aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCB9_9BACT rbh
Displaying 14 items

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