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13_1_40cm_3_scaffold_394

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_394_1
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(3..245)
DNA (243bp) protein (81aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=930945 species="Archaea;
Tryptophan--tRNA ligase n=9 Tax=Sulfolobus islandicus RepID=C3MQW3_SULIL
13_1_40cm_3_scaffold_394_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(248..1771)
DNA (1524bp) protein (508aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RBG_13_Bathyarchaeota_46_16b_curated
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Pyrococcus furiosus RepID=SYFB_PYRFU
13_1_40cm_3_scaffold_394_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1881..3383)
DNA (1503bp) protein (501aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_16_Archaea_50_20_curated
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Pyrococcus sp. ST04 RepID=I3REL5_9EURY
phenylalanyl-tRNA synthetase subunit alpha
13_1_40cm_3_scaffold_394_4
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3896..4933)
DNA (1038bp) protein (346aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] Tax=CG_Solirubrobact_01
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase, type II n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0H8_DEHLB
13_1_40cm_3_scaffold_394_5
unknown

Not on your lists

5297..5443
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_3_scaffold_394_6
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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6122..6298
DNA (177bp) protein (59aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=589924 species="Archaea; Euryarch
DNA primase DnaG n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1X0_FERPA
TOPRIM domain protein
13_1_40cm_3_scaffold_394_7
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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6321..6818
DNA (498bp) protein (166aa)
DNA primase (EC:2.7.7.-)
DNA primase DnaG n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SS22_IGNAA
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_40cm_3_scaffold_394_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(6808..9147)
DNA (2340bp) protein (780aa)
DNA polymerase Pol2; K02319 DNA polymerase I [EC:2.7.7.7] Tax=RBG_16_Archaea_50_20_curated
DNA polymerase n=1 Tax=Thermofilum sp. 1910b RepID=S5Z6M3_9CREN rbh
DNA polymerase
13_1_40cm_3_scaffold_394_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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9781..10827
DNA (1047bp) protein (349aa)
Glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037DA33D
glycine hydroxymethyltransferase
13_1_40cm_3_scaffold_394_10
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10855..11496
DNA (642bp) protein (214aa)
Methyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2NQU0_9CLOT
Methyltransferase {ECO:0000313|EMBL:ERK31236.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
phosphoserine phosphatase SerB
13_1_40cm_3_scaffold_394_11
unknown

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11961..12443
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_3_scaffold_394_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12531..13571)
DNA (1041bp) protein (347aa)
Putative phosphosugar isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE4_NITGG
phosphosugar isomerase
Putative phosphosugar isomerase {ECO:0000313|EMBL:AFU59046.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_3_scaffold_394_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13698..14219)
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LPX1_9EURY
sortase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
acetyltransferase
13_1_40cm_3_scaffold_394_14
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(14249..15370)
DNA (1122bp) protein (374aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036F62FC
7-keto-8-aminopelargonate synthetase-like enzyme Tax=RBG_13_Euryarchaeota_31_8_curated
13_1_40cm_3_scaffold_394_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15537..16592
DNA (1056bp) protein (352aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1156417 species="Bac
L-threonine 3-dehydrogenase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9Q7_9BACI
L-threonine 3-dehydrogenase
13_1_40cm_3_scaffold_394_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16600..16923)
DNA (324bp) protein (108aa)
Signal recognition particle 19 kDa protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBK0_METEZ
signal recognition particle, subunit SRP19 (SRP19); K03105 signal recognition particle subunit SRP19 Tax=RBG_16_Archaea_50_20_curated
ribonucleoprotein complex SRP, Srp19 component
13_1_40cm_3_scaffold_394_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(16944..17342)
DNA (399bp) protein (133aa)
30S ribosomal protein S8e n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T4T0_9ARCH
30S ribosomal protein S8e; K02995 small subunit ribosomal protein S8e Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8e
13_1_40cm_3_scaffold_394_18
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(17721..18209)
DNA (489bp) protein (163aa)
N-acetyltransferase GCN5 Tax=RBG_16_Chloroflexi_56_11_curated
N-acetyltransferase GCN5 id=14632404 bin=bin9_gal15 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
N-acetyltransferase GCN5
13_1_40cm_3_scaffold_394_19
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(18455..19063)
DNA (609bp) protein (203aa)
Methyltransferase type 11 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAQ8_9CREN
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
type 11 methyltransferase
13_1_40cm_3_scaffold_394_20
unknown

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19302..19757
DNA (456bp) protein (152aa)
hypothetical protein
13_1_40cm_3_scaffold_394_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

19784..20608
DNA (825bp) protein (275aa)
Protein APE_1980.1 n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Y1980_AERPE
competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA Tax=RBG_13_Bathyarchaeota_46_16b_curated
putative molybdopterin binding protein
13_1_40cm_3_scaffold_394_22
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(20860..21522)
DNA (663bp) protein (221aa)
Pheromone shutdown protein n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=Q8U181_PYRFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF68722.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY203
13_1_40cm_3_scaffold_394_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

21646..22410
DNA (765bp) protein (255aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV32_9EURY
hypothetical protein
13_1_40cm_3_scaffold_394_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

22407..23213
DNA (807bp) protein (269aa)
Pnp; purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Archaea_50_20_curated
methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TXU2_9EURY
13_1_40cm_3_scaffold_394_25
RBG_16_Archaea_50_20_curated, Archaea

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23207..23989
DNA (783bp) protein (261aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_16_Archaea_50_20_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-L14 RepID=UPI0003793FA5
13_1_40cm_3_scaffold_394_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

24031..27567
DNA (3537bp) protein (1179aa)
Chromosome segregation ATPase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TB52_9ARCH
chromosome segregation protein smc1; K03529 chromosome segregation protein Tax=RBG_16_Archaea_50_20_curated
SMC domain-containing protein
13_1_40cm_3_scaffold_394_27
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

27564..28241
DNA (678bp) protein (226aa)
Condensin subunit ScpA n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH0_9ARCH
segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Archaea_50_20_curated
segregation and condensation protein A
13_1_40cm_3_scaffold_394_28
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

28219..28812
DNA (594bp) protein (198aa)
Transcriptional regulator containing HTH domain n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RXG4_CENSY
putative transcriptional regulator; K06024 segregation and condensation protein B Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator containing HTH domain
13_1_40cm_3_scaffold_394_29
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(28846..29751)
DNA (906bp) protein (302aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Tax=BJP_IG2102_Bacteroidetes_40_12
13_1_40cm_3_scaffold_394_30
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(29748..30953)
DNA (1206bp) protein (402aa)
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_16_Archaea_50_20_curated
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14631529 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15 rbh
methionine synthase (B12-independent) (EC:2.1.1.14)
Displaying items 1-30 of 40 in total

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