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13_1_40cm_3_scaffold_3379

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3379_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3..92
DNA (90bp) protein (30aa)
rps15p; 30S ribosomal protein S15P Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3379_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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127..1464
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362F589 rbh
putative single-stranded-DNA-specific exonuclease Tax=RBG_16_Euryarchaeota_68_12_curated
putative single-stranded-DNA-specific exonuclease
13_1_40cm_3_scaffold_3379_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1468..2151)
DNA (684bp) protein (228aa)
Uncharacterized protein n=3 Tax=Halorubrum RepID=M0EPN6_9EURY
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_3379_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2236..2796)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_3379_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2836..4008)
DNA (1173bp) protein (391aa)
ORC1-type DNA replication protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9Z6_9EURY rbh
Origin of replication recognition protein / Cell division control protein 6 Tax=RBG_16_Euryarchaeota_68_12_curated
cdc62; ORC1-type DNA replication protein
13_1_40cm_3_scaffold_3379_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4068..4463
DNA (396bp) protein (132aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3379_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4558..6099
DNA (1542bp) protein (514aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3379_8
unknown

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6165..7028
DNA (864bp) protein (288aa)

This feature has no annotations

13_1_40cm_3_scaffold_3379_9
unknown

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comp(6894..7787)
DNA (894bp) protein (298aa)

This feature has no annotations

13_1_40cm_3_scaffold_3379_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7989..8207)
DNA (219bp) protein (73aa)
transcriptional regulator n=1 Tax=Thermoplasma acidophilum RepID=UPI00001660FF
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_3379_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8278..8814
DNA (537bp) protein (179aa)
Hydrolase, NUDIX family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CT82_9FIRM
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
NUDIX hydrolase
13_1_40cm_3_scaffold_3379_12
RLO_RIF05_58_11, RIF5, Bacteria

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comp(8817..9239)
DNA (423bp) protein (141aa)
Protein containing DUF1801 n=2 Tax=mine drainage metagenome RepID=T0Z418_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
hypothetical protein
13_1_40cm_3_scaffold_3379_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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9256..9717
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C086D
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain Tax=RBG_16_Euryarchaeota_68_12_curated
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
13_1_40cm_3_scaffold_3379_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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9743..10579
DNA (837bp) protein (279aa)
Cell division protein FtsZ (EC:3.4.24.-)
Cell division protein FtsZ n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJB2_METAC
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3379_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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10576..10734
DNA (159bp) protein (53aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3379_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(10821..11102)
DNA (282bp) protein (94aa)
NEQ303 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MU4_NANEQ
50S ribosomal protein L35Ae
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3379_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11399..12964)
DNA (1566bp) protein (522aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RBG_16_Euryarchaeota_68_12_curated
Threonine--tRNA ligase n=1 Tax=Thermococcus sp. AM4 RepID=B7R0Q2_9EURY
Threonyl-tRNA synthetase
13_1_40cm_3_scaffold_3379_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13037..13888
DNA (852bp) protein (284aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RBG_16_Euryarchaeota_67_27_curated
folP; folp-like dihydropteroate synthase (EC:2.5.1.15)
dihydropteroate synthase id=4014773 bin=GWF2_Lentisphaerae_57_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
13_1_40cm_3_scaffold_3379_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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13923..14225
DNA (303bp) protein (101aa)
hypothetical protein; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-] Tax=RBG_16_Euryarchaeota_68_12_curated
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5Z6_METEZ
IMP biosynthesis enzyme PurP domain-containing protein
Displaying 19 items

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