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13_1_40cm_3_scaffold_1971

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1971_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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540..938
DNA (399bp) protein (133aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKP2_IGNAJ id=5223689 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RBG_16_Gemmatimonadetes_66_8_curated
Electron transfer flavoprotein alpha/beta-subunit
13_1_40cm_3_scaffold_1971_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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935..1924
DNA (990bp) protein (330aa)
etfA; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
Electron transfer flavoprotein alpha/beta-subunit
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit id=24469728 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_3_scaffold_1971_3
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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2270..3550
DNA (1281bp) protein (427aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=1250187 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
electron transferring flavoprotein dehydrogenase
13_1_40cm_3_scaffold_1971_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4078..4905)
DNA (828bp) protein (276aa)
diguanylate cyclase Tax=RBG_13_Deltaproteobacteria_61_14_curated
Diguanylate cyclase id=4516555 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
diguanylate cyclase
13_1_40cm_3_scaffold_1971_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4906..5787)
DNA (882bp) protein (294aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
MoeA domain protein domain I and II
Molybdopterin molybdochelatase id=4324808 bin=GWF2_Syntrophobacterales_56_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_1971_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6111..6629)
DNA (519bp) protein (173aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHH0_MOOTA
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
13_1_40cm_3_scaffold_1971_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6626..7237)
DNA (612bp) protein (204aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Molybdopterin-guanine dinucleotide biosynthesis protein A
Molybdenum cofactor guanylyltransferase id=4621961 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_1971_8
unknown

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comp(7240..8058)
DNA (819bp) protein (273aa)

This feature has no annotations

13_1_40cm_3_scaffold_1971_9
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8093..8503)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036BA705
CoA-binding protein {ECO:0000313|EMBL:KJA10691.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
CoA-binding protein
13_1_40cm_3_scaffold_1971_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(8500..9333)
DNA (834bp) protein (278aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative formate dehydrogenase family accessory protein (FdhD) id=4827330 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
formate dehydrogenase family accessory protein FdhD
13_1_40cm_3_scaffold_1971_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9320..9739)
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV1_9SPHI
6-pyruvoyl tetrahydrobiopterin synthase
13_1_40cm_3_scaffold_1971_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9742..10764)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E4F05
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter
13_1_40cm_3_scaffold_1971_13
RBG_16_OP11_Levybacteria_35_6_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10757..11452)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
binding-protein-dependent transport system inner membrane protein; K05773 tungstate transport system permease protein Tax=RBG_16_OP11_Levybacteria_35_6_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_3_scaffold_1971_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11440..12111)
DNA (672bp) protein (224aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1971_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12166..13752)
DNA (1587bp) protein (529aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_1_40cm_3_scaffold_1971_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13763..14857
DNA (1095bp) protein (365aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_1971_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14854..15183
DNA (330bp) protein (110aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
13_1_40cm_3_scaffold_1971_18
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15047..15763)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JR61_BURP1
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
13_1_40cm_3_scaffold_1971_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15832..16599
DNA (768bp) protein (256aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
13_1_40cm_3_scaffold_1971_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16686..18197
DNA (1512bp) protein (504aa)
Amino acid transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIE9_SINAD
amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid transporter
13_1_40cm_3_scaffold_1971_21
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18226..19008
DNA (783bp) protein (261aa)
AlgR/AgrA/LytR family regulatory protein RpfD n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=R9S575_SIMAS
response regulator of the LytR/AlgR family Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
AlgR/AgrA/LytR family regulatory protein RpfD
13_1_40cm_3_scaffold_1971_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19084..20181
DNA (1098bp) protein (366aa)
amino acid permease Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative uncharacterized protein id=4983172 bin=GWA2_Elusimicrobia_56_46 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
amino acid/polyamine/organocation transporter
Displaying 22 items

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