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13_1_40cm_3_scaffold_1691

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1691_1
unknown

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comp(2..328)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_1691_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(421..1080)
DNA (660bp) protein (220aa)
Putative cyclase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9ZCE7_STRSW
Cyclase {ECO:0000313|EMBL:GAN45762.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
cyclase
13_1_40cm_3_scaffold_1691_3
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1059..1460)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI00035D3021
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EKF25598.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
TetR family transcriptional regulator
13_1_40cm_3_scaffold_1691_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1787..2059
DNA (273bp) protein (91aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin Tax=GWC2_Gemmatimonadetes_71_10_curated
ferredoxin
13_1_40cm_3_scaffold_1691_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2056..2856)
DNA (801bp) protein (267aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC35_GEMAT
putative hydrolase
13_1_40cm_3_scaffold_1691_6

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comp(2853..3245)
DNA (393bp) protein (131aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4I4_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL07563.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
13_1_40cm_3_scaffold_1691_7
unknown

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3764..3934
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_3_scaffold_1691_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3938..5056
DNA (1119bp) protein (373aa)
putative ribonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
putative ribonuclease
13_1_40cm_3_scaffold_1691_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5053..5361)
DNA (309bp) protein (103aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
protein of unknown function DUF59
13_1_40cm_3_scaffold_1691_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5403..5783)
DNA (381bp) protein (127aa)
Uncharacterized protein id=4040228 bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiol-disulfide oxidoreductase DCC Tax=GWA2_Rokubacteria_73_35_curated
thiol-disulfide oxidoreductase DCC
13_1_40cm_3_scaffold_1691_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5773..6921)
DNA (1149bp) protein (383aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
beta-lactamase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1691_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6912..8024)
DNA (1113bp) protein (371aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14430795 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_1_40cm_3_scaffold_1691_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8021..8845)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:AHG89655.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1691_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8935..11208
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037842C0
mmpL; hypothetical protein; K06994 putative drug exporter of the RND superfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_1691_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11205..11372)
DNA (168bp) protein (56aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_1691_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11471..11851)
DNA (381bp) protein (127aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin
Putative pilin {ECO:0000313|EMBL:AHG88689.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1691_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11957..13708)
DNA (1752bp) protein (584aa)
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
Displaying 17 items

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