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13_1_40cm_3_scaffold_2525

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2525_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(32..1282)
DNA (1251bp) protein (417aa)
LysM domain-containing protein id=7200269 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
peptidoglycan-binding LysM
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_2525_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1279..1686)
DNA (408bp) protein (136aa)
Single-stranded DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G5_GEMAT
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ssb; single-strand binding protein
13_1_40cm_3_scaffold_2525_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1789..2142)
DNA (354bp) protein (118aa)
Ribosomal-protein-alanine acetyltransferase n=10 Tax=Clostridium RepID=G5I7P5_9CLOT
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AHG91095.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2525_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2216..2950)
DNA (735bp) protein (245aa)
Peptidase M22 glycoprotease n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8V5_THEID
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M22 glycoprotease
13_1_40cm_3_scaffold_2525_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2947..3354)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G9_GEMAT
putative protein family UPF0079, ATPase
Uncharacterized protein {ECO:0000313|EMBL:AHG91097.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2525_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3317..5341)
DNA (2025bp) protein (675aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
UvrABC system protein B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
13_1_40cm_3_scaffold_2525_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5351..7531)
DNA (2181bp) protein (727aa)
GTP pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT
RelA/SpoT family protein
RelA/SpoT family protein {ECO:0000313|EMBL:AHG91100.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2525_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7528..8211)
DNA (684bp) protein (228aa)
DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H3_GEMAT
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RadC
13_1_40cm_3_scaffold_2525_9
RLO_PLX_64_10, Bacteria

Not on your lists

comp(8283..10031)
DNA (1749bp) protein (583aa)
Protein translocase subunit SecA n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MMX5_CRYCD
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
protein translocase subunit secA
13_1_40cm_3_scaffold_2525_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(10007..11560)
DNA (1554bp) protein (518aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=GWC2_Gemmatimonadetes_71_10_curated
Protein translocase subunit secA
13_1_40cm_3_scaffold_2525_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11568..12128)
DNA (561bp) protein (187aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=NADD_ROSS1
13_1_40cm_3_scaffold_2525_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12134..12898)
DNA (765bp) protein (255aa)
transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A004
hypothetical protein; K05807 putative lipoprotein Tax=GWC2_Gemmatimonadetes_71_10_curated
outer membrane assembly lipoprotein YfiO
13_1_40cm_3_scaffold_2525_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12895..13809)
DNA (915bp) protein (305aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_2525_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13806..14564)
DNA (759bp) protein (253aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
TPR repeat-containing protein id=109566 bin=ACD73 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
hypothetical protein
13_1_40cm_3_scaffold_2525_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(14548..15519)
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase Tax=RBG_13_Acidobacteria_68_16_curated
NAD-dependent epimerase/dehydratase id=4682841 bin=GWA2_Deltaproteo_65_63 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_2525_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15516..16451)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_2525_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16436..17755)
DNA (1320bp) protein (440aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C4K0_9BACT
nucleotide sugar dehydrogenase
13_1_40cm_3_scaffold_2525_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17752..19014)
DNA (1263bp) protein (421aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W5_GEMAT
nucleotide-sugar dehydrogenase Tax=GWC2_Gemmatimonadetes_71_10_curated
nucleotide sugar dehydrogenase
Displaying 18 items

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