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13_1_40cm_3_scaffold_384

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_384_1
unknown

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1..318
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_3_scaffold_384_2
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(266..1210)
DNA (945bp) protein (315aa)
Glycosyltransferase n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B1X6_PELLD
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABB24655.1}; TaxID=319225 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon lu
13_1_40cm_3_scaffold_384_3
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1276..2049
DNA (774bp) protein (258aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4091120 bin=GWF2_Syntrophobacterales_56_9 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
type 11 methyltransferase
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_40cm_3_scaffold_384_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2590..3093
DNA (504bp) protein (168aa)
group 1 glycosyl transferase id=14627092 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
group 1 glycosyl transferase Tax=CSP1_6_Rokubacteria
glycosyl transferase family protein
13_1_40cm_3_scaffold_384_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3107..3865
DNA (759bp) protein (253aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase {ECO:0000313|EMBL:BAH40163.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH40163.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sou
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD6_GEMAT
13_1_40cm_3_scaffold_384_6
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3858..4850
DNA (993bp) protein (331aa)
glycosyl transferase family 1 n=1 Tax=Actinoplanes globisporus RepID=UPI00036FCB94
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP01665.1}; TaxID=477245 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strep
13_1_40cm_3_scaffold_384_7
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5078..6211
DNA (1134bp) protein (378aa)
glycoside hydrolase; K13668 phosphatidylinositol alpha-1,6-mannosyltransferase [EC:2.4.1.-] id=24657126 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY65147.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
13_1_40cm_3_scaffold_384_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6159..7244)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
Patatin
Patatin {ECO:0000313|EMBL:AHG91762.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_384_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7349..8134
DNA (786bp) protein (262aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A623_GEMAT
putative peptide ABC transporter permease protein
Putative peptide ABC transporter permease protein {ECO:0000313|EMBL:BAH37683.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatim
13_1_40cm_3_scaffold_384_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8131..9318
DNA (1188bp) protein (396aa)
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A624_GEMAT
putative aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative aminotransferase
13_1_40cm_3_scaffold_384_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(9367..10626)
DNA (1260bp) protein (420aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Tyrosine--tRNA ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=SYY_ANAD2
Tyrosyl-tRNA synthetase
13_1_40cm_3_scaffold_384_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10698..12842
DNA (2145bp) protein (715aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT rbh
penicillin-binding protein, 1A family
13_1_40cm_3_scaffold_384_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12856..14058
DNA (1203bp) protein (401aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA9_CHLTF
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytosine deaminase
13_1_40cm_3_scaffold_384_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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14070..14528
DNA (459bp) protein (153aa)
Arginine repressor n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRC0_CLOSH
ArgR; arginine repressor; K03402 transcriptional regulator of arginine metabolism Tax=RBG_16_Gemmatimonadetes_66_8_curated
argR; arginine repressor ArgR
13_1_40cm_3_scaffold_384_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14589..15818
DNA (1230bp) protein (410aa)
argininosuccinate synthase family protein (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea RepID=S8CLT7_9LAMI
Argininosuccinate synthase
13_1_40cm_3_scaffold_384_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15815..17263
DNA (1449bp) protein (483aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N7_GEMAT
13_1_40cm_3_scaffold_384_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17311..17862
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A628_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_384_18
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17859..18263
DNA (405bp) protein (135aa)
hypothetical protein Tax=GWC2_Deltaproteobacteria_42_11_curated
Uncharacterized protein id=4815622 bin=GWC2_Deltaproteobacteria_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
13_1_40cm_3_scaffold_384_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(18260..18883)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A629_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF4390
13_1_40cm_3_scaffold_384_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(18885..20633)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A630_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_384_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(20738..22129)
DNA (1392bp) protein (464aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A631_GEMAT
putative NtrC family two-component response regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative NtrC family two-component response regulator
13_1_40cm_3_scaffold_384_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(22126..22635)
DNA (510bp) protein (170aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A634_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative two-component histidine kinase
13_1_40cm_3_scaffold_384_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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23425..23844
DNA (420bp) protein (140aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function UPF0047
hypothetical protein id=14426564 bin=bin1_lowGC species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
13_1_40cm_3_scaffold_384_24
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(23825..24934)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V0B9_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EMY33479.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
13_1_40cm_3_scaffold_384_25
unknown

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comp(24931..25047)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 25 items

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