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13_1_40cm_3_scaffold_742_1

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: 3..887

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 294.0
  • Bit_score: 445
  • Evalue 6.20e-122
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 288.0
  • Bit_score: 425
  • Evalue 4.70e-116
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 286.0
  • Bit_score: 393
  • Evalue 7.30e-107

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 885
GAGATCCGGCGGCTGGCCACCGAGGATGCCGAAGACGCGTCGCGACGGGCGGTGCCCGATGTGCGGGGCGACGTCGATTTCGAGGGGGTGAGCTTCGCCTATGTGGCCGGCCGCGACGTGCTCCGCCAGGTGTCTTTCCACGCAGCGGCGGGCTCAACCACGGCGCTCGTGGGGTCGTCGGGGGCGGGGAAGAGCACGCTGATCAGCCTGGTGCTGGCGTTCAACCGCCCCACGGCCGGGCGGATCGTGGTGGACGGGCGGGACCTCGCCGGCCTGCGGCTCGCCGAGTATCGCCGGCACCTCGGCGTGGTGCTCCAGGACAACTTCCTGTTCGACGGTACGATCGCCGAGAACATCGCGTTCGCGCGGCCCCACGCCACGCGCGGCGAGATCGAGGAGGCGGGCCGCATCGCGCACTGCGACGAGTTCGTGCGCCGCTTCGAGCAGGGGTACGATACCATCGTCGGGGAGCGCGGCGTGAAGCTCTCGGGCGGCGAGCGCCAGCGGGTGTCGATCGCCCGCGCCATCCTCGCCGATCCCCGCATCCTGATCCTCGACGAGGCCACGTCCAGCCTCGACTCGGAGAGTGAGGCCGCGATCCAGGACGGGCTGCGCACGCTGCGGCGCGGCCGCACGACGTTCGTGATCGCCCACCGGCTCTCGACCATCCGCAGCGCCGATCAGATTCTCGTCCTGGAGGGTGGGGAGATCGTCGAGCGGGGCACGCACCAGGAGCTGCTCGCCAAGCATGGCCGCTACCGCCAGCTGTACGACAAGCAGTACCGGTTCGAGCACGACCGCTTCGTGAACCCCGGGGAGGATTTCACCCCCGAGCCCGAGGCCCCGGTCGTGTCGGCGCCGGTGACGCCTCCGACGCGCCTCTGA
PROTEIN sequence
Length: 295
EIRRLATEDAEDASRRAVPDVRGDVDFEGVSFAYVAGRDVLRQVSFHAAAGSTTALVGSSGAGKSTLISLVLAFNRPTAGRIVVDGRDLAGLRLAEYRRHLGVVLQDNFLFDGTIAENIAFARPHATRGEIEEAGRIAHCDEFVRRFEQGYDTIVGERGVKLSGGERQRVSIARAILADPRILILDEATSSLDSESEAAIQDGLRTLRRGRTTFVIAHRLSTIRSADQILVLEGGEIVERGTHQELLAKHGRYRQLYDKQYRFEHDRFVNPGEDFTPEPEAPVVSAPVTPPTRL*