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13_1_40cm_3_scaffold_742

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_742_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..887
DNA (885bp) protein (295aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_40cm_3_scaffold_742_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(949..1158)
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG89448.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_742_3
unknown

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comp(1176..1325)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_3_scaffold_742_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1479..2393)
DNA (915bp) protein (305aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGI3_ANADE
13_1_40cm_3_scaffold_742_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2491..5115
DNA (2625bp) protein (875aa)
Outer membrane receptor protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_742_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5253..5984
DNA (732bp) protein (244aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428812 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_40cm_3_scaffold_742_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5981..7627)
DNA (1647bp) protein (549aa)
diguanylate cyclase Tax=RBG_16_Gemmatimonadetes_66_8_curated
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
13_1_40cm_3_scaffold_742_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(7661..10360)
DNA (2700bp) protein (900aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036F9540
membrane associated hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_3_scaffold_742_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10453..12639
DNA (2187bp) protein (729aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKR1_RHOMR
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEN73909.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_3_scaffold_742_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12636..13160
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC68_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein of unknown function DUF2911
13_1_40cm_3_scaffold_742_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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13188..14852
DNA (1665bp) protein (555aa)
Amidase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCB1_MYXSD
gatA2; amidase Tax=RBG_13_Acidobacteria_68_16_curated
Amidase
13_1_40cm_3_scaffold_742_12
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

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14870..15622
DNA (753bp) protein (251aa)
Glycosyl transferase family 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C487_SPHTD
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
family 2 glycosyl transferase
13_1_40cm_3_scaffold_742_13
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15633..16439
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LL2_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD41434.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
13_1_40cm_3_scaffold_742_14
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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comp(16430..17521)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6K8_HALH1
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
hypothetical protein
13_1_40cm_3_scaffold_742_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(17522..18724)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629FB
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG88245.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 15 items

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