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13_1_40cm_3_scaffold_11740

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_11740_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1..324
DNA (324bp) protein (108aa)
Rhomboid-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ5_KORVE
rhomboid family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rhomboid-like protein
13_1_40cm_3_scaffold_11740_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(673..900)
DNA (228bp) protein (76aa)
Transcriptional regulator, AbrB family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6B7_GEOUR
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ABQ27335.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geob
13_1_40cm_3_scaffold_11740_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(927..2063)
DNA (1137bp) protein (379aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
signal peptide prediction id=12555378 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_11740_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2060..4309)
DNA (2250bp) protein (750aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
protein of unknown function DUF1355
hypothetical membrane protein id=12556786 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_11740_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4461..5651)
DNA (1191bp) protein (397aa)
Protein TolA n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G3S2_ENTLS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
protein TolA
13_1_40cm_3_scaffold_11740_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5623..8004)
DNA (2382bp) protein (794aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
hypothetical membrane protein id=12556779 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_11740_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8214..9677)
DNA (1464bp) protein (488aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
double-transmembrane region domain protein
hypothetical membrane protein id=12556782 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_11740_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10119..10292)
DNA (174bp) protein (58aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_3_scaffold_11740_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10256..10987)
DNA (732bp) protein (244aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative uncharacterized protein id=4613995 bin=GWF2_Lentisphaerae_49_21 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
13_1_40cm_3_scaffold_11740_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10991..11998)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI000377AFE2
MoxR-like ATPase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
MoxR-like ATPase
13_1_40cm_3_scaffold_11740_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12038..12856)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5363
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_3_scaffold_11740_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12862..14505)
DNA (1644bp) protein (548aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein id=12555379 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Displaying 12 items

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