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13_1_40cm_3_scaffold_11122

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_11122_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..1063
DNA (1062bp) protein (354aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M20
13_1_40cm_3_scaffold_11122_2
unknown

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comp(1066..1335)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_3_scaffold_11122_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1332..1808)
DNA (477bp) protein (159aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
iron-sulfur binding protein
13_1_40cm_3_scaffold_11122_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1789..2199)
DNA (411bp) protein (137aa)
Epoxyqueuosine reductase id=4620331 bin=GWF2_Methylomirabilis_70_14 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4Fe-4S ferredoxin, iron-sulfur binding Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
iron-sulfur cluster binding protein
13_1_40cm_3_scaffold_11122_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2196..2462)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABN2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_11122_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2485..3216
DNA (732bp) protein (244aa)
Aminotransferase class V n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7D5_HERA2
class V aminotransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
class V aminotransferase
13_1_40cm_3_scaffold_11122_7
unknown

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comp(3072..3554)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_3_scaffold_11122_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3639..4268
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM6_GEMAT
hypothetical protein; K06966 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_11122_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4265..5401
DNA (1137bp) protein (379aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Deoxyhypusine synthase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLS6_GLOVI id=5224706 bin=16ft_combo_ws3_JS1 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
deoxyhypusine synthase-like protein
13_1_40cm_3_scaffold_11122_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6106..6819
DNA (714bp) protein (238aa)
Major facilitator superfamily MFS_1 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9H4_GEOUR
major facilitator family transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
major facilitator transporter
13_1_40cm_3_scaffold_11122_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6829..7827
DNA (999bp) protein (333aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373396F
D-alanine--D-alanine ligase
13_1_40cm_3_scaffold_11122_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7824..8816
DNA (993bp) protein (331aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_11122_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8878..9528)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
13_1_40cm_3_scaffold_11122_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9538..10260)
DNA (723bp) protein (241aa)
Cytochrome c n=1 Tax=Clostridium ultunense Esp RepID=M1ZCA4_9CLOT
Cytochrome c {ECO:0000313|EMBL:CCQ95473.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
putative cytochrome c
13_1_40cm_3_scaffold_11122_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10370..11644
DNA (1275bp) protein (425aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG87780.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_11122_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11634..13232)
DNA (1599bp) protein (533aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_40cm_3_scaffold_11122_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13325..14584
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_40cm_3_scaffold_11122_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14655..15455
DNA (801bp) protein (267aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
fadJ; multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17)
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IN01_ANADE
Displaying 18 items

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