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13_1_40cm_3_scaffold_1897

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1897_1
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1258)
DNA (1257bp) protein (419aa)
amidase (EC:3.5.1.4)
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Nevskia ramosa RepID=UPI0003B673A6
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:EED33721.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
13_1_40cm_3_scaffold_1897_2

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1573..2616
DNA (1044bp) protein (348aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48719.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Oxidoreductase domain protein id=1839986 bin=GWE2_Bacteroidetes_42_39 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
oxidoreductase domain-containing protein
13_1_40cm_3_scaffold_1897_3

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2565..3041
DNA (477bp) protein (159aa)
Probable NADH-dependent dehydrogenase-putative NAD-employing oxidoreductase of the GFO family protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HSH9_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48719.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase domain-containing protein
13_1_40cm_3_scaffold_1897_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3038..4324
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002EAC172
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AHG88635.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1897_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4326..5564
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCP8_GEOOG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB74283.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
13_1_40cm_3_scaffold_1897_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5734..6933
DNA (1200bp) protein (400aa)
Oxidoreductase molybdopterin binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEL7_CHIPD rbh
molybdopterin binding oxidoreductase
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:ACU57839.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinopha
13_1_40cm_3_scaffold_1897_7
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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7298..7606
DNA (309bp) protein (103aa)
Putative sulfite oxidase cytochrome subunit n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFI2_9GAMM
Putative sulfite oxidase cytochrome subunit {ECO:0000313|EMBL:EAW30396.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobac
cytochrome c class I
13_1_40cm_3_scaffold_1897_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7897..8847
DNA (951bp) protein (317aa)
xylose isomerase n=1 Tax=Spirosoma luteum RepID=UPI000380EC76
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCH55687.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi B
xylose isomerase
13_1_40cm_3_scaffold_1897_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9004..11130)
DNA (2127bp) protein (709aa)
Serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIA8_KORVE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABF43392.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_1_40cm_3_scaffold_1897_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(11166..11570)
DNA (405bp) protein (135aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P82_SOLUE
serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
serine/threonine protein kinase
13_1_40cm_3_scaffold_1897_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(11616..12917)
DNA (1302bp) protein (434aa)
putative class-III aminotransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
aminotransferase class-III
putative class-III aminotransferase id=24392623 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_3_scaffold_1897_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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12999..13232
DNA (234bp) protein (78aa)
id=12557624 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
id=12557624 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_1897_13
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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13250..13546
DNA (297bp) protein (99aa)
PemK-like protein; K07171 mRNA interferase [EC:3.1.-.-] Tax=RBG_13_Spirochaetes_68_11_curated
MazF family transcriptional regulator; K07171 mRNA interferase [EC:3.1.-.-] id=12557623 bin=CNBR_ACIDO species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MazF family transcriptional regulator
13_1_40cm_3_scaffold_1897_14
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

13778..14101
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003671B82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK42545.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM
13_1_40cm_3_scaffold_1897_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14110..15147)
DNA (1038bp) protein (346aa)
Putative class-III aminotransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I556_CALAS
putative class-III aminotransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
aminotransferase class-III
13_1_40cm_3_scaffold_1897_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

15172..16335
DNA (1164bp) protein (388aa)
Patatin n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0H9_NITHN rbh
patatin; K07001 NTE family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
patatin
13_1_40cm_3_scaffold_1897_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16393..17646
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003671B82
Abhydrolase, bacterial
Abhydrolase, bacterial {ECO:0000313|EMBL:AHG91633.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 17 items

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