ggKbase home page

13_1_40cm_3_scaffold_5847

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5847_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1097..2191
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUA5_AZOBR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_3_scaffold_5847_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4031..4564
DNA (534bp) protein (178aa)
Glycosyltransferase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YEJ1_9BRAD
Glycosyltransferase {ECO:0000313|EMBL:KJC49498.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LT
glycosyltransferase
13_1_40cm_3_scaffold_5847_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4599..5204
DNA (606bp) protein (202aa)
id=12556190 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
id=12556190 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_5847_4
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5159..5953)
DNA (795bp) protein (265aa)
Polysaccharide deacetylase n=1 Tax=Prevotella baroniae F0067 RepID=U2NLH5_9BACT
putative xylanase/chitin deacetylase Tax=CG_Delta_03
polysaccharide deacetylase
13_1_40cm_3_scaffold_5847_5
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6148..7092)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ7 RepID=UPI00036F282C
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADC73030.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalk
13_1_40cm_3_scaffold_5847_6
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(7096..8640)
DNA (1545bp) protein (515aa)
polysaccharide biosynthesis protein Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
polysaccharide biosynthesis protein id=24536400 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
membrane protein involved in the export of O-antigen and teichoic acid
13_1_40cm_3_scaffold_5847_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8648..8938)
DNA (291bp) protein (97aa)
Glycosyl transferase family 2 n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRA9_CYAP4
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
family 2 glycosyl transferase
13_1_40cm_3_scaffold_5847_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8935..10245)
DNA (1311bp) protein (437aa)
Glycosyl transferase family protein (Fragment) n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UGY6_MYCVA
glycosyl transferase family 2 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
glycosyl transferase family protein
13_1_40cm_3_scaffold_5847_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10245..11855)
DNA (1611bp) protein (537aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_5847_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11852..12919)
DNA (1068bp) protein (356aa)
Putative glycosyl transferase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RBF8_CLAMS
glycosyl transferase
Putative glycosyl transferase {ECO:0000313|EMBL:CAQ01699.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. se
13_1_40cm_3_scaffold_5847_11
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12949..14181)
DNA (1233bp) protein (411aa)
Glycosyl transferase group 1 n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAI2_THEAQ rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EED09507.1}; TaxID=498848 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus aquaticus Y51MC23.;"
glycosyltransferase
13_1_40cm_3_scaffold_5847_12
unknown

Not on your lists

comp(14178..15122)
DNA (945bp) protein (315aa)

This feature has no annotations

13_1_40cm_3_scaffold_5847_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15553..16389)
DNA (837bp) protein (279aa)
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBB4_THET1 rbh
WecB/TagA/CpsF family glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
WecB/TagA/CpsF family glycosyl transferase
13_1_40cm_3_scaffold_5847_14
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(16376..17383)
DNA (1008bp) protein (336aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBB5_THET1 rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACZ42080.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_3_scaffold_5847_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17404..18849)
DNA (1446bp) protein (482aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037365BA rbh
hypothetical protein
13_1_40cm_3_scaffold_5847_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18864..20504)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003821F60
lipopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
lipopolysaccharide biosynthesis protein
13_1_40cm_3_scaffold_5847_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(20523..21245)
DNA (723bp) protein (241aa)
Polysaccharide export protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6T2_ACISM
polysaccharide export protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
polysaccharide export protein
Displaying 17 items

View Taxonomy