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13_1_40cm_3_scaffold_596

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_596_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..371)
DNA (369bp) protein (123aa)
protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Protoporphyrinogen oxidase n=2 Tax=Sulfobacillus acidophilus RepID=F8I6C5_SULAT
hemY; protoporphyrinogen oxidase
13_1_40cm_3_scaffold_596_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(533..1273)
DNA (741bp) protein (247aa)
ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7A1_SPHTD
13_1_40cm_3_scaffold_596_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1420..2214)
DNA (795bp) protein (265aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase id=4562636 bin=GWA2_Elusimicrobia_69_24 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_3_scaffold_596_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2283..2678)
DNA (396bp) protein (132aa)
Transcriptional regulator n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHE1_MYCNE
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
transcriptional regulator
13_1_40cm_3_scaffold_596_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2814..3425
DNA (612bp) protein (204aa)
phaF; poly(3-hydroxyalkanoate) granule-associated protein PhaF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phaF; poly(3-hydroxyalkanoate) granule-associated protein PhaF id=12556919 bin=CNBR_ACIDO species=Pseudomonas mandelii genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_596_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3480..4067
DNA (588bp) protein (196aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_40cm_3_scaffold_596_7
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4093..4674
DNA (582bp) protein (194aa)
TVP38/TMEM64 family membrane protein slr0305 n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI000346F28A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY47955.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7
13_1_40cm_3_scaffold_596_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4684..5511
DNA (828bp) protein (276aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12556920 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_596_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5585..5938
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein id=12556920 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_3_scaffold_596_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5964..6884)
DNA (921bp) protein (307aa)
type II R/M system modification methyltransferase; K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]; K00590 site-specific DNA-methyltransferase (cytosine-N4-specific) [EC:2.1.1.113] id=12556921 bin=CNBR_ACIDO species=Methanocaldococcus jannaschii genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA methylase N-4/N-6 domain-containing protein
13_1_40cm_3_scaffold_596_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7032..7241)
DNA (210bp) protein (70aa)
id=12556922 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12556922 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_596_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7405..10671)
DNA (3267bp) protein (1089aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
spermine synthase (EC:2.5.1.16)
Spermine/spermidine synthase family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFF2_9BACT rbh
13_1_40cm_3_scaffold_596_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10788..13679)
DNA (2892bp) protein (964aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFF1_9BACT rbh
CnaB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
TonB-dependent receptor
13_1_40cm_3_scaffold_596_14
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(13837..16833)
DNA (2997bp) protein (999aa)
TonB-dependent receptor id=24393957 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
TonB-dependent receptor Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
TonB-dependent receptor
13_1_40cm_3_scaffold_596_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17024..19606
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMG9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH55097.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
13_1_40cm_3_scaffold_596_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

19613..20614
DNA (1002bp) protein (334aa)
Peptidase M20 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025N5_SOLUE
peptidase M20 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
peptidase M20
Displaying 16 items

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