ggKbase home page

13_1_40cm_3_scaffold_1272

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1272_1
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)
UvrABC system protein A n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG67_THET1
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
13_1_40cm_3_scaffold_1272_2
Thermoanaerobacter sp. X514, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(426..809)
DNA (384bp) protein (128aa)
thioesterase n=1 Tax=Thermoanaerobacter indiensis RepID=UPI00037F5075
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABY92463.1}; TaxID=399726 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="T
13_1_40cm_3_scaffold_1272_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(817..1188)
DNA (372bp) protein (124aa)
hypothetical protein id=14627394 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_3_scaffold_1272_4
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1239..3320)
DNA (2082bp) protein (694aa)
UvrABC system protein B n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYL6_PELTS
UvrB; excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
13_1_40cm_3_scaffold_1272_5
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3633..4151)
DNA (519bp) protein (173aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9U7_CHLAD
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ACL24462.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;"
13_1_40cm_3_scaffold_1272_6
unknown

Not on your lists

4436..4768
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_3_scaffold_1272_7
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(4880..7066)
DNA (2187bp) protein (729aa)
Macrolide export ATP-binding/permease protein MacB id=3114414 bin=GWC1_CPR2_39_9 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good rbh
Macrolide export ATP-binding/permease protein MacB Tax=GWC2_CPR2_39_10
macB; macrolide export ATP-binding protein/permease MacB
13_1_40cm_3_scaffold_1272_8
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(7190..7522)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0X824_CULQU
divalent-cation tolerance protein CutA; K03926 periplasmic divalent cation tolerance protein Tax=RBG_16_Planctomycetes_43_13_curated
hypothetical protein
13_1_40cm_3_scaffold_1272_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7531..8193)
DNA (663bp) protein (221aa)
PAP2 family protein n=1 Tax=Clostridium sp. CAG:609 RepID=R7P6N2_9CLOT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PA-phosphatase-like phosphoesterase
13_1_40cm_3_scaffold_1272_10
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8181..9005)
DNA (825bp) protein (275aa)
fomramidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DN12_9FIRM
13_1_40cm_3_scaffold_1272_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9081..11771)
DNA (2691bp) protein (897aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RBG_16_Armatimonadetes_67_12_curated
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] id=14633067 bin=bin9_gal15 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
DNA polymerase I (EC:2.7.7.7)
13_1_40cm_3_scaffold_1272_12
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

11845..12423
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ICH4_9CHLR
hypothetical protein Tax=RBG_16_Chloroflexi_57_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1272_13
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

12542..12889
DNA (348bp) protein (116aa)
MgtC/SapB transporter id=2154249 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=GWB2_Nitrospirae_47_37_curated
MgtC family transporter
13_1_40cm_3_scaffold_1272_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

12886..13791
DNA (906bp) protein (302aa)
DegV family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C519_SPHTD
degV family protein
DegV family protein {ECO:0000313|EMBL:ACZ39336.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="S
13_1_40cm_3_scaffold_1272_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(13745..14731)
DNA (987bp) protein (329aa)
beta-lactamase domain-containing protein Tax=RBG_13_Chloroflexi_51_52_curated
Zn-dependent hydrolase including glyoxylase-like protein id=1242529 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Zn-dependent hydrolase
13_1_40cm_3_scaffold_1272_16
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14789..15127
DNA (339bp) protein (113aa)
putative sterol carrier protein Tax=CG_Anaero_01
Putative sterol carrier protein id=1943739 bin=GWD2_Chloroflexi_49_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_3_scaffold_1272_17
unknown

Not on your lists

comp(15147..15455)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_3_scaffold_1272_18
unknown

Not on your lists

comp(15807..15893)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 18 items

View Taxonomy