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13_1_40cm_3_scaffold_317

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_317_1
unknown

Not on your lists

1..186
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_3_scaffold_317_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170..1534
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA1529 RepID=UPI00030B6A90
Variovorax paradoxus strain MEDvA23 contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31548.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
SCE36.10c; pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_3_scaffold_317_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1578..1871
DNA (294bp) protein (98aa)
Transglycosylase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7H8_9RHIZ
transglycosylase
Transglycosylase {ECO:0000313|EMBL:AGK58227.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrific
13_1_40cm_3_scaffold_317_4
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1920..2240
DNA (321bp) protein (107aa)
Membrane protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4NY37_9CAUL
Membrane protein {ECO:0000313|EMBL:ESQ86662.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC46
transglycosylase-associated protein
13_1_40cm_3_scaffold_317_5
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

2560..3702
DNA (1143bp) protein (381aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=COBT_CHLAD
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
13_1_40cm_3_scaffold_317_6

Not on your lists

3945..4883
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000372C14F
Periplasmic binding protein {ECO:0000313|EMBL:KGA16002.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
ABC Fe3+ transporter substrate-binding protein
13_1_40cm_3_scaffold_317_7
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4883..5974
DNA (1092bp) protein (364aa)
ABC transporter permease n=1 Tax=Rhodococcus qingshengii BKS 20-40 RepID=M2XGK8_9NOCA rbh
ABC transporter permease {ECO:0000313|EMBL:EME22694.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
putative ABC transporter permease protein
13_1_40cm_3_scaffold_317_8
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5971..6777
DNA (807bp) protein (269aa)
ABC transporter related n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3Q8_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00389.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_3_scaffold_317_9
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6774..7340
DNA (567bp) protein (189aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ACU53751.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ACU53751.1};; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicro
Cob(I)alamin adenosyltransferase n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LYE3_ACIFD
13_1_40cm_3_scaffold_317_10
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7340..7855
DNA (516bp) protein (172aa)
cobyric acid synthase n=1 Tax=Thermus oshimai RepID=UPI00035EA071
cobyric acid synthase
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
13_1_40cm_3_scaffold_317_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7867..8592
DNA (726bp) protein (242aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9R0_AZOL4
cobV; Cobalamin-5-phosphate synthase
13_1_40cm_3_scaffold_317_12

Not on your lists

8589..9143
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Pseudoalteromonas flavipulchra RepID=UPI00029B0FAF
Marine sediment metagenome DNA, contig: S12H4_S11818 {ECO:0000313|EMBL:GAJ15856.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
alpha-ribazole phosphatase
13_1_40cm_3_scaffold_317_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(9133..9855)
DNA (723bp) protein (241aa)
2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=RBG_13_Chloroflexi_68_17_curated
2-phosphosulfolactate phosphatase family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY66_ANATU
2-phosphosulfolactate phosphatase subfamily protein
13_1_40cm_3_scaffold_317_14
unknown

Not on your lists

9935..10201
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_3_scaffold_317_15
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10212..10664)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000360CADA
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:KHD73255.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
13_1_40cm_3_scaffold_317_16
unknown

Not on your lists

comp(10775..11359)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_3_scaffold_317_17
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(11447..11785)
DNA (339bp) protein (113aa)
Transcriptional regulator, HxlR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXK5_RUBXD
HxlR family transcriptional regulator
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_3_scaffold_317_18
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11961..12740
DNA (780bp) protein (260aa)
dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029B3861
short-chain dehydrogenase Tax=RBG_16_Gamma2_60_9_curated
short-chain dehydrogenase
13_1_40cm_3_scaffold_317_19
unknown

Not on your lists

12743..13186
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_3_scaffold_317_20
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists

comp(13193..13759)
DNA (567bp) protein (189aa)
PspC domain protein n=2 Tax=Chloroflexus RepID=A9WK71_CHLAA
phage shock protein PspC Tax=CG_CPR03_02
PspC domain-containing protein
13_1_40cm_3_scaffold_317_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13805..15070)
DNA (1266bp) protein (422aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein FolC (EC:6.3.2.17 6.3.2.12) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
FolC bifunctional protein n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB31_AMMDK
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_1_40cm_3_scaffold_317_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15087..15413)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KG15_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_3_scaffold_317_23
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(15468..16307)
DNA (840bp) protein (280aa)
Bifunctional protein FolD n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8I2_THELD
5, 10-methylenetetrahydrofolate dehydrogenase (NADP+), methenyltetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strai
13_1_40cm_3_scaffold_317_24
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16354..17508)
DNA (1155bp) protein (385aa)
UPF0272 protein Rcas_1165 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=Y1165_ROSCS
hypothetical protein
UPF0272 protein Rcas_1165 {ECO:0000255|HAMAP-Rule:MF_01074}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflex
13_1_40cm_3_scaffold_317_25
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17505..17774)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI00037A7F0A
dienelactone hydrolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:CDF04303.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Meg
13_1_40cm_3_scaffold_317_26
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17944..18459
DNA (516bp) protein (172aa)
phosphorinothyrcin n-acetyltransferase (EC:2.3.1.183)
Putative Phosphinothricin N-acetyltransferase n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S4AUK5_9ACTO
GCN5 family acetyltransferase {ECO:0000313|EMBL:KDS86472.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyc
13_1_40cm_3_scaffold_317_27
unknown

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comp(18591..18776)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_3_scaffold_317_28
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18787..19062)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NEM5_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KDN84259.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC
hypothetical protein
Displaying 28 items

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