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13_1_40cm_3_scaffold_6519

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6519_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..1008
DNA (1008bp) protein (336aa)
Subtilisin-like serine protease n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI15_9BURK
Subtilisin-like serine protease {ECO:0000313|EMBL:CDM65575.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
subtilisin-like serine protease
13_1_40cm_3_scaffold_6519_2
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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comp(824..1264)
DNA (441bp) protein (147aa)
PREDICTED: putative paraneoplastic antigen-like protein 6B-like protein LOC649238-like n=1 Tax=Homo sapiens RepID=UPI000387C0F0
Predicted protein {ECO:0000313|EMBL:EDO30974.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematost
13_1_40cm_3_scaffold_6519_3
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1391..2230
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DCU9_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF92178.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_3_scaffold_6519_4
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2246..4684
DNA (2439bp) protein (813aa)
PAS fold family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VY11_9CYAN rbh
PAS fold family {ECO:0000313|EMBL:EDX73110.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
13_1_40cm_3_scaffold_6519_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4868..5191
DNA (324bp) protein (108aa)
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:CDM64499.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas
Uncharacterized protein family UPF0079, ATPase id=4127410 bin=GWF2_Nitrospirae_44_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
13_1_40cm_3_scaffold_6519_6
unknown

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5284..6117
DNA (834bp) protein (278aa)

This feature has no annotations

13_1_40cm_3_scaffold_6519_7

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6137..6793
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN29462.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_3_scaffold_6519_8
unknown

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comp(6724..7026)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_6519_9

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7053..7499
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN29462.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_3_scaffold_6519_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7486..7926
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI0003669EF2
Bacillithiol system oxidoreductase, YphP/YqiW family {ECO:0000313|EMBL:CDM66667.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methy
protein of unknown function DUF1094
13_1_40cm_3_scaffold_6519_11
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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comp(7950..8396)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L7_CALAS
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
hypothetical protein
13_1_40cm_3_scaffold_6519_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8463..10664
DNA (2202bp) protein (734aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDM66666.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDM66666.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sou
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE46_CHLTF
13_1_40cm_3_scaffold_6519_13
unknown

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comp(11018..12325)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00037BDD29
13_1_40cm_3_scaffold_6519_14
unknown

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comp(12480..12653)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_3_scaffold_6519_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(12653..13264)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036E2CBF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_6519_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13578..14084
DNA (507bp) protein (169aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P44_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ88576.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so
13_1_40cm_3_scaffold_6519_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14201..14707
DNA (507bp) protein (169aa)
methyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6E2D3
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:CDM66312.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methyltransferase
13_1_40cm_3_scaffold_6519_18
unknown

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comp(14570..15007)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_3_scaffold_6519_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15996..16895
DNA (900bp) protein (300aa)
PrcB C-terminal {ECO:0000313|EMBL:CDM66602.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_3_scaffold_6519_20
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(16886..17359)
DNA (474bp) protein (158aa)
MOSC domain containing protein Tax=RBG_16_KB1_OP1_55_9_curated
MOSC domain containing protein id=14632418 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
MOSC domain containing protein
13_1_40cm_3_scaffold_6519_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17546..18901)
DNA (1356bp) protein (452aa)
4-aminobutyrate aminotransferase apoenzyme {ECO:0000313|EMBL:CDM66738.1}; EC=2.6.1.19 {ECO:0000313|EMBL:CDM66738.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ12_9BACT
Displaying 21 items

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