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13_1_40cm_3_scaffold_1643

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1643_1
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(3..461)
DNA (459bp) protein (153aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZQ3_RUBXD
oxidoreductase alpha (molybdopterin) subunit
Formate dehydrogenase {ECO:0000313|EMBL:KIF33396.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
13_1_40cm_3_scaffold_1643_2
unknown

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comp(491..1612)
DNA (1122bp) protein (374aa)

This feature has no annotations

13_1_40cm_3_scaffold_1643_3
GWB1_OP11_Woesebacteria_43_5_curated, Woesebacteria, Microgenomates, Bacteria

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comp(1629..2723)
DNA (1095bp) protein (365aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=GWB1_OP11_Woesebacteria_43_5_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E4I0_9BACT
membrane-associated zinc metalloprotease
13_1_40cm_3_scaffold_1643_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(2723..3829)
DNA (1107bp) protein (369aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EEF6_THECK
1-deoxy-D-xylulose 5-phosphate reductoisomerase
13_1_40cm_3_scaffold_1643_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(3837..4472)
DNA (636bp) protein (212aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Phosphatidate cytidylyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS21_PUSST
phosphatidate cytidylyltransferase
13_1_40cm_3_scaffold_1643_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(4469..5194)
DNA (726bp) protein (242aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
uppS; UDP diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=14628991 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
undecaprenyl diphosphate synthase (EC:2.5.1.31)
13_1_40cm_3_scaffold_1643_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5191..5751)
DNA (561bp) protein (187aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ribosome-recycling factor id=1713217 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
frr; ribosome recycling factor
13_1_40cm_3_scaffold_1643_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5761..6486)
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.22) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Facklamia ignava CCUG 37419 RepID=K1LLY3_9LACT
13_1_40cm_3_scaffold_1643_9
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

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comp(6510..7034)
DNA (525bp) protein (175aa)
translation elongation factor EFTs/EF1B dimerization; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_11_curated
Elongation factor Ts id=2074380 bin=GWE2_CPR3_35_7 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
Translation elongation factor EFTs/EF1B dimerization
13_1_40cm_3_scaffold_1643_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(7034..7924)
DNA (891bp) protein (297aa)
30S ribosomal protein S2 n=4 Tax=Bacillus RepID=RS2_BACLD rbh
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsB; 30S ribosomal protein S2
13_1_40cm_3_scaffold_1643_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8130..8531
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_1643_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(8602..10467)
DNA (1866bp) protein (622aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
DNA polymerase III, epsilon subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG63_THET1
DNA polymerase III subunit epsilon
13_1_40cm_3_scaffold_1643_13
unknown

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10593..12479
DNA (1887bp) protein (629aa)

This feature has no annotations

13_1_40cm_3_scaffold_1643_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(12470..12724)
DNA (255bp) protein (85aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase id=4664613 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_3_scaffold_1643_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12682..13722)
DNA (1041bp) protein (347aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glutamate dehydrogenase id=4664613 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_3_scaffold_1643_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13719..14036)
DNA (318bp) protein (106aa)
ATP-dependent DNA ligase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP-dependent DNA ligase id=2982344 bin=GWC2_Chloroflexi_73_18 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Displaying 16 items

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